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Submitted SNP(ss) Details: ss17360278           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuCC-200402.chr1.NT_032977.6_23795200
RefSNP(rs#)rs11207827
Submitted Batch IDCSHL-HuCC-200402
Submitted DateFeb 19, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 19 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUCC-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuCC101b19000129844062.R -584 32

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss17360278|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 CTTTTTTTTT CTCTCCAACA GCTCAACCAT ATACCCTCAG ATTGTTCAGC CAACTTTGAT
 TTTTCTAGGA AAGGTTTGTT AGTGTTCACA GATGGTTCCA TCACTAATGG AAATGTCCAC
 AGGCCCTCTA ATAACTCGAC TGTATCTGGG TTATTTCCGT GGACCCCGAA GTTGGGAAAT
 GAAGACTTTA ACTCAGTCAT
 Y
 CAACAGATGG CTCAGGTAAA GTTGTATCTT CTCATGGAAA TATTTAGCTT CATTTCTCCT
 GTTTTAGTTT TACAAAGGAG CTTATACTCA TTCTTTTTGC TGTAAAATGT ATTAGTATGT
 ATTTTGCTTG CTTCTATTTT TATATTGTTA GGAGAAACTG ACACCATTTT CTAACCTGTG
 TGTTGAAAAT TTATTGACTT

  Submitted Frequency for ss17360278 back to top
There is no frequency submission for ss17360278.


  dbSNP summary of Genotypes for ss17360278 back to top
No sufficient data to compute Hardy-weinberg probability for ss17360278.


  Submitted individual genotype for ss17360278 back to top
There is no individual genotype data for ss17360278.