Submitter | Handle | CSHL-HAPMAP | Submitter SNP ID | CSHL-HuCC-200402.chr13.NT_009952.14_8952085 | RefSNP(rs#) | rs943288 | Submitted Batch ID | CSHL-HuCC-200402 | Submitted Date | Feb 19, 2004 | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 19 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_009952
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CSHL-HUCC-200402 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | A/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | population count: 1 | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence position qualityHuCC101b19000129106386.F 445 28 |
>gnl|dbSNP|ss17502721|allelePos=201|len=701|taxid=9606|alleles='A/T'|mol=Genomic TGCCCACCAC ATACTCCAGT AATTTACTTG TGTGTTTGTC TCCCAGACAG GCAGTGAGCT
TCTTCAGAAC AGAAACCAAG TCTTATTCAT TGTCCCTGAC ACTGAGCGGA GGCTTTAGTT
CATTCTGATG AATGAATAAT TGGAAAAAAG AAGTGGTCCT AGTGCAAAAT GAATATGGCC
AGCAGCTAGA ATGCCCTGGA
W
AAATGATACC GCTACAAGGT AAGTATTAAA CAATGGATAC Tgggcgggta tggtgttcac
acctgtaatc ccagcacttt gggaggccaa ggtagcgaga atcgcttgag gccagaatct
tgagaccagc ctgcgcaaca aggcgtgatc ccttctctac aaataataaa aaaagaaatt
agccagcaat ccttttgtag ttcatgagca tgataatcgg gtgttcacgc acttgtgtga
gatgtgccac ccttgaattt tgttatgatg tttccacaat agcccatctg acatgaaaat
tcaaaaaaaa agaaattagc tgttcacggt gatgcacacc tgtagtcaca gctaatcagg
aggctgagac aggaggatcg cacatcactt gagcccagga gttcaagcct tcagcgagct
atgatcctgc cactgcaatc cagtgtgaac agagtgagcc cctgcctcca gaaagaataa
aaGGGGAAAG AGGGGTGTTT
There is no frequency submission for ss17502721.
No sufficient data to compute Hardy-weinberg probability for ss17502721.
There is no individual genotype data for ss17502721.
|