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Submitted SNP(ss) Details: ss17502721           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuCC-200402.chr13.NT_009952.14_8952085
RefSNP(rs#)rs943288
Submitted Batch IDCSHL-HuCC-200402
Submitted DateFeb 19, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 19 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUCC-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuCC101b19000129106386.F 445 28

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss17502721|allelePos=201|len=701|taxid=9606|alleles='A/T'|mol=Genomic
 TGCCCACCAC ATACTCCAGT AATTTACTTG TGTGTTTGTC TCCCAGACAG GCAGTGAGCT
 TCTTCAGAAC AGAAACCAAG TCTTATTCAT TGTCCCTGAC ACTGAGCGGA GGCTTTAGTT
 CATTCTGATG AATGAATAAT TGGAAAAAAG AAGTGGTCCT AGTGCAAAAT GAATATGGCC
 AGCAGCTAGA ATGCCCTGGA
 W
 AAATGATACC GCTACAAGGT AAGTATTAAA CAATGGATAC Tgggcgggta tggtgttcac
 acctgtaatc ccagcacttt gggaggccaa ggtagcgaga atcgcttgag gccagaatct
 tgagaccagc ctgcgcaaca aggcgtgatc ccttctctac aaataataaa aaaagaaatt
 agccagcaat ccttttgtag ttcatgagca tgataatcgg gtgttcacgc acttgtgtga
 gatgtgccac ccttgaattt tgttatgatg tttccacaat agcccatctg acatgaaaat
 tcaaaaaaaa agaaattagc tgttcacggt gatgcacacc tgtagtcaca gctaatcagg
 aggctgagac aggaggatcg cacatcactt gagcccagga gttcaagcct tcagcgagct
 atgatcctgc cactgcaatc cagtgtgaac agagtgagcc cctgcctcca gaaagaataa
 aaGGGGAAAG AGGGGTGTTT

  Submitted Frequency for ss17502721 back to top
There is no frequency submission for ss17502721.


  dbSNP summary of Genotypes for ss17502721 back to top
No sufficient data to compute Hardy-weinberg probability for ss17502721.


  Submitted individual genotype for ss17502721 back to top
There is no individual genotype data for ss17502721.

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