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Submitted SNP(ss) Details: ss1750495           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000925-457434
RefSNP(rs#)rs175174
Submitted Batch IDOVLP-000925-2-5
Submitted DateOct 05, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPOct 5 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC006547 SequenceAccession1:AC006547 SequenceVersion1:9 SequenceContigName1:Contig1 SequenceContigPosition1:101062 SequenceLocalName2:AC006549 SequenceAccession2:AC006549 SequenceVersion2:28 SequenceContigName2:Contig1 SequenceContigPosition2:19016 PolyBayesConfidence:94

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1750495|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 TTCGGCCTGG TCTACGTGCT GAACCACGCT GAGGGGCTGG GAGCCGCGCA CACCACCATC
 ACGTATCCTT GGTTCCTGTG GGCCTCATTG CAGAGGCGAT GTGGACCGGG GACACGTTCA
 CCAGGGAGAT TGAGCCTCAG AAGGCTTGGT TCCTGCCCAG GGATCCCCAG TGGGCAGGTG
 GCCGTCCCTA GGTTGGGAGG
 R
 GGTTTGTCCA CAGGCACCTG CTCTGTGCTG CTGCGATGGG GTCTGCGGTG TCCTGGCCTG
 CACCGTTGGC CTTAACGGGC TAGCATGGCT GTCATGTGTG TGGCCGGCCT CTTCTTCATC
 CCTGTCATTG GCCTCACTGG CTTCCATGTG GTGCTGGTCA CTCGGGGGCG CACCACCAAC
 GAGCAGGTGC AGACCCCATG

  Submitted Frequency for ss1750495 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
CEPH
MULTI-NATIONAL
184A=1.00000000
G=0.00000000
1_2004SEQUENOM


  dbSNP summary of Genotypes for ss1750495 back to top
No sufficient data to compute Hardy-weinberg probability for ss1750495.


  Submitted individual genotype for ss1750495 back to top
There is no individual genotype data for ss1750495.

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