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Submitted SNP(ss) Details: ss18076956           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA11321-200402.chr1.NT_028050.13_8258745
RefSNP(rs#)rs12025301
Submitted Batch IDSC-CHR1_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA11321
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1A_2-867j09.p1ka -398 36S1A_2-867j09.q1ka 162 35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18076956|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GAGGAAATAC AGCTATTTTC CCAACCCACT CCTTCCCCAA CACATTCTCA GAAACTTCTG
 GCTTGTGACC TTCCATTCGT GTTTTAGAGT CCAGCCTCTG GTTCTCTGTA ACTATAGGAG
 CAGATGTTGA AATCAGCCAC AGTGTTTTAT ATTCAGCTCC CATCCTCTCC TCTCAAAGTA
 CATACAAATG TGGGCCCCTC
 R
 AAGAAGCCAC CTTTATATGC AGTCATAGAC TATAAATTCT TTGTGAGATT ACTTCTCAGC
 AAAAGAGAGA CATGAAATGT CTACCAGCCA GCATTCCCAA ATGAATCTTG ACTTTTAATC
 CCACAAGATC TTTCAAACTG AGGTGAATTT CTTTGCAGTG AGACTTTGCA AATCCACAAA
 AAGTATTTCC TTTTAAGATG

  Submitted Frequency for ss18076956 back to top
There is no frequency submission for ss18076956.


  dbSNP summary of Genotypes for ss18076956 back to top
No sufficient data to compute Hardy-weinberg probability for ss18076956.


  Submitted individual genotype for ss18076956 back to top
There is no individual genotype data for ss18076956.