Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR1_NA17109-200402.chr1.NT_077988.2_37610 | RefSNP(rs#) | rs9700771 | Submitted Batch ID | SC-CHR1_NA17109-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_077988
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR1_NA17109 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | A/C | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position quality1SNP2-664h19.q1k -507 56 |
>gnl|dbSNP|ss18156031|allelePos=501|len=1001|taxid=9606|alleles='A/C'|mol=Genomic gttggagagt agctgagaga gacagaagag tccctgaggg ttgggggtga gaacatgagg
gagacggggg agtaagtcag tgaaattcgt gagttcggtg gtgtatcgtg ggtgcctgaa
actgactcca gctggaatct agagaagttt tgagagtagc tgaaagagac acaagagtcc
ctgtgggctg agggCAAaga cctgagagag accagggagg acctcagtga agtctgtgag
tctgtaggtg attccggagt gtgggaggct gactcccgct gaaatgtggg cgtggtggga
gagtagctgg gacagacagg agagtcccag ggggctgggg gtgaagacat gagagagagt
ggggagtaac tcagtgaaat tgctgagttg gttggtgata cctgggtgcc tggaactgac
ccccgctgaa atctgggcat ggttggagag tagctgggac acacaggaga gtccctgagg
gctgggggtg aagacatgag
M
gagaccgggg agtaactgag tgaaactggt gagtttggtg gcgactccgg ggtgcgtgga
actgactcca gctgaaatgt gggcgtggtt ggagagtagc tgggacagtc aggagagtcc
ctgaggactg gtgaagacat gagagagact ggagagtaat tgagtgaaat tggtgagttt
ggtggtgatt cctgggtgcc tggaactgac tcccgctgaa gtgtgggcgt ggttggagag
tagctgggac acacaggaga gtccctgagg gttggagata aagacgtgct agagactgag
gagtaactga gtgaaattgg ggagtttggt ggtgattccg gggtgcctgg aacGGactcc
agctgaaatg tgggcgtggt tggagagtag ctgggacaga cgggagagtc cctgagggat
ggtgaagaca tgagagagac tggggagtaa cgcagtgaaa ttggtgagtt tggtggtgat
ttctgggtgc ctgcaacGGA
There is no frequency submission for ss18156031.
No sufficient data to compute Hardy-weinberg probability for ss18156031.
There is no individual genotype data for ss18156031.
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