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Submitted SNP(ss) Details: ss18243011           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA07340-200402.chr1.NT_004511.16_1252586
RefSNP(rs#)rs10753238
Submitted Batch IDSC-CHR1_NA07340-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA07340
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1C_2-989l13.q1k 454 56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18243011|allelePos=201|len=657|taxid=9606|alleles='G/A'|mol=Genomic
 CAACTGGGAA CCTTAAGAGC TTGCAGGTTG AGAGCTGACA GAGTGGACAG CTGGCTTAGC
 AGGCTGGCCC TGGGCCAGGC CAGGGTTGCA ACCTCACGTC CTGCAGCTTC CAGCGCCCTC
 TTGGACAGAG ACAGATGATT CCAGCTCTCC AAGTCCAATT CTGCCTCTCC TTGGGATATT
 CCCTAATGCC TGAGATCACC
 R
 CCATGTCCTA TTACCTCCTC CACTCTTTAC CCTCAAGATG TTCATTATCT GTCCTCTTGT
 TCCTCTCCTT TCCTCAAGCT CACTTGTGGA TCTGACTGCT GTACTGCCCA CGGCACCTGC
 TGCACCAAGC CTTCCCTCCC CACAGGCCCC ATGCATACGC TGTTTTCCCT GGCTTATTTA
 TTCCTCCCTG CCTTGTCCCT CATCTGTTAA GACTCACCCT AAGTGTCAAG TGTGCCAGGA
 AAACCTTCTG GGTTCCCACC TGGGTCAGGA CCACACACAG GACTCTGAAG CCCTGCATTT
 ACTGCACGTG TCACACTGTC TTTCTGGATC GGTCTCCCCA ACTAAACTGA GCATTCCTTG
 ACATAAGAGA TCATATCTCA TGGATCTCTG CAGCATATAA AATGGTGCCC CATTCATTCT
 TTCGTTCACT GAATGTGTAT TCTGATGCAT CCCAGT

  Submitted Frequency for ss18243011 back to top
There is no frequency submission for ss18243011.


  dbSNP summary of Genotypes for ss18243011 back to top
No sufficient data to compute Hardy-weinberg probability for ss18243011.


  Submitted individual genotype for ss18243011 back to top
There is no individual genotype data for ss18243011.