Submitted SNP(ss) Details: ss18291173

Submitted SNP(ss) Details: ss18291173

Submitter
Handle	SC_SNP
Submitter SNP ID	SC-CHR1_NA07340-200402.chr1.NT_077913.2_252898
RefSNP(rs#)	rs12142199
Submitted Batch ID	SC-CHR1_NA07340-200402
Submitted Date	Feb 20, 2004
Publication Cited	[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Feb 20 2004 12:00:00:000AM

Resource Links
GenBank Accession	NT_077913
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR1_NA07340
Ascertainment Samplesize	3
Population	N.D.

Allele
Observed Allele	G/A
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	c_g/a

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence position qualityS1C_2-586f09.p1k -148 51S1C_2-400l08.q1k 97 32

Fasta sequence (Legend)

 GGGCCAGGTG GGGGGTCAGG GCAGCAGATG CCCCCACCCC CACTGCAGGC CCAAGCCCAG
 ACACCTGCGG AAGACAGGAG ACCGACGGGT GTGGATGTGC TGGCCGGCCC TGCCGCGGGC
 CTCACCATCG GTCCTGGGTT GTCAGCAAAA GCCCGGTCGA AGGCCTTGAT GTGCTTGAAC
 TCAAACATGT TCCTCTGCAC
 R
 AAAGTCTTGC GGATCTTCTG GTTGGTCCAG GGGATGAACA GCTTGTAGTA GTGGTTGGCC
 TTCTCGGTCA GCCCCGTGGA GAAGTAGATG GGCACCTTCA GGTTCATGCG CTCCCTGGGG
 ACCACCGGCC CAGTCAGCAC AGTGGCCACA GGGGAGAATG CTGCAGGGCA GGACTCGGCC
 GGGTCACCCC CAACACCCGT

Submitted Frequency for ss18291173

There is no frequency submission for ss18291173.

dbSNP summary of Genotypes for ss18291173

No sufficient data to compute Hardy-weinberg probability for ss18291173.

Submitted individual genotype for ss18291173

There is no individual genotype data for ss18291173.

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