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Submitted SNP(ss) Details: ss18359489           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR6_NA07340-200402.chr1.NT_034471.3_193999
RefSNP(rs#)rs12184277
Submitted Batch IDSC-CHR6_NA07340-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR6_NA07340
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS6C_2-573d21.p1k -261 51S6C_2-464d17.p1k 317 56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18359489|allelePos=501|len=1001|taxid=9606|alleles='A/G'|mol=Genomic
 tggcaggtgc ctgtaatccc agctactcgg gaggctgagg cagagaattg tttgaacccg
 ggatgcggag gttgcagtga gcggagatcg cgccactgca ctccagcctg ggcaacagac
 caagactccg tctaaacaaa caaaTATATG TGTGTATATA TATGCGATCG AGCCCGGGAG
 GTTGAGATTA CAGTGAgctg agattatata agcgatcgag cactggaggt tgatgttaca
 atgcgctgag attgcgccat tgcactccag cctgtgtaac agagggagac tctgtctcta
 aaaaaTTATA TGCAAGTGAG AGCTTTTCTT CCAGCACTCA TGCTCAGACT GAAGAAAGTA
 ATTGggccag gcccggtggc tcacgccttt aatcccagca ttttgggagg cggaggcgga
 agtgggtgga tcacttgagc tcaggaattc cagactagtt tgggcaacat ggtggaaccc
 tttctctaca aaaatacaaa
 R
 aattagctgg acatggtggc acgcgcttgt agtctccgca acttgccggg cttaggcggg
 agaatcgctC Agctgcagcc tcgacctcca ggggcaatcc atttcagcct cccaaagtgc
 tgagattaca ggaatgagcc atcgtgcctg gcTTTACACT ATATTTTAAC ACTTTTTTTG
 AAAATGGAAA CTTTTACAGG CAATTCACTT CCTTCAAACT AATGATAAGG AAGTGATGCT
 GTTCTGTTCT GTTTTGtttt ttgtttttgt gggttttttt tcttttttga gatggggtct
 tgcccaggtt ggagtgaggt ggtgcaaaca aggctcactg cagccttgac cttcgggctc
 aaggaatcct tccccgtcag cctccccggt agctaggact acaggtgcat gctaccacgc
 ttggctaatt ctttttttga aatggagtct cactctgtct cccaggctgg agtgcagtgg
 tgcaatctcg gctcactgca

  Submitted Frequency for ss18359489 back to top
There is no frequency submission for ss18359489.


  dbSNP summary of Genotypes for ss18359489 back to top
No sufficient data to compute Hardy-weinberg probability for ss18359489.


  Submitted individual genotype for ss18359489 back to top
There is no individual genotype data for ss18359489.