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Submitted SNP(ss) Details: ss18439187           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR9-12_NA11321-200402.chr10.NT_030059.11_8475930
RefSNP(rs#)rs11202607
Submitted Batch IDSC-CHR9-12_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR9-12_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS9A_2-1297g16.p1k 144 45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18439187|allelePos=201|len=437|taxid=9606|alleles='C/T'|mol=Genomic
 TAGAGTATTG ATTGATTGCT CATAAGTTAA ATTGGTAAAG TTAGAGACAA CTATTCTAAC
 ACCTCACCAT TGAAATTTAT ATGCCACCTT GTCTTTCATA AAAGCTGAAA ATTGTTACCT
 AAAATGAAAA TCAACTTCAT GTTTTGAAGA TAGTTATAAA TATTGTTCTT TGTTACAATT
 TCGGGCACCG CATATTAAAA
 Y
 GTAACTTTAT TGTTCCAATA TGTAACATGG AGGGCCAGGT CATAAATAAT GACATTATAA
 TGGGCTTTTG CACTGTTATT ATTTTTCCTT TGGAATGTGA AGGTCTGAAT GAGGGTTTTG
 ATTTTGAATG TTTCAATGTT TTTGAGAAGC CTTGCTTACA TTTTATGGTG TAGTCATTGG
 AAATGGAAAA ATGGCATtat atatattata tatataaata tatattatac ataCTC

  Submitted Frequency for ss18439187 back to top
There is no frequency submission for ss18439187.


  dbSNP summary of Genotypes for ss18439187 back to top
No sufficient data to compute Hardy-weinberg probability for ss18439187.


  Submitted individual genotype for ss18439187 back to top
There is no individual genotype data for ss18439187.