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Submitted SNP(ss) Details: ss1848098           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000925-415841
RefSNP(rs#)rs1234694
Submitted Batch IDOVLP-000925-4-3
Submitted DateOct 06, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPOct 6 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC013728 SequenceAccession1:AC013728 SequenceVersion1:4 SequenceContigName1:Contig25 SequenceContigPosition1:5211 SequenceLocalName2:AL357140 SequenceAccession2:AL357140 SequenceVersion2:4 SequenceContigName2:Contig6 SequenceContigPosition2:3024 PolyBayesConfidence:96

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1848098|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 ACGCCAGCGA GTGGAACATC TCGGTCGCAC TCTCATTGGT TCCAGGGGGC CGGAAGTGCG
 TGCGTCCAGC GGAAGTGCTC CCCCGGCGCG GTCCGCCAGG CCAGTGCCCT CAGGTAGGCG
 GGGCCCCCTG GCCCTAAACT CTGGGACTGG CGGGCGGTCA GGCGGCACAG GGGGAATCCC
 GGGGGCCTAA GGAGGTTGTC
 Y
 CAGTTTTTGT CAGGTAGGCC CGGAAGGAGT TTCGGGGACC ATGGGTTTAC GGCTACCTCT
 GGTGGCAATT GGGGCCTGTT GGAGCCCGGC CGCCGCGGGA CCTACGTGCC GGACTTCAAG
 TTCCCGCGTG GGGTGGGATT TGCTGCGGTG GCCGGAGCTG ATTCTTCACC CAGTCCTGTT
 GGTTCTGGGC CAAACCCTCC

  Submitted Frequency for ss1848098 back to top
There is no frequency submission for ss1848098.


  dbSNP summary of Genotypes for ss1848098 back to top
No sufficient data to compute Hardy-weinberg probability for ss1848098.


  Submitted individual genotype for ss1848098 back to top
There is no individual genotype data for ss1848098.

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