| Submitter | | Handle | SC_SNP | | Submitter SNP ID | SC-CHRX_NA11321-200402.chr1.NT_004671.15_8729161 | | RefSNP(rs#) | rs10922217 | | Submitted Batch ID | SC-CHRX_NA11321-200402 | | Submitted Date | Feb 20, 2004 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004671
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHRX_NA11321 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | G/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence position qualityXChr_X_11321_2-415k14.p1k -577 56 |
>gnl|dbSNP|ss19058863|allelePos=404|len=904|taxid=9606|alleles='G/T'|mol=Genomic TTCTTGTCTT CATACACATT TTAATGGGAT ATTGACAGTA ACTGTTAAAT AGATGATGCT
ATAGAGTGGA TATGTGCCCC TGCTAAACAG CAATTATTAT TGTTGTTTAC ATGTTTCAAA
CTTGTTTACA TTGCTTCAAT ATAGCTAAAC TTGTGATAGA TATAACTGTA ACTAATTTGT
ATTTGGGCAC Tgccagatct aaatttaagt tctggcacta ccactgtcta attctgtgac
ttttggcaag tttcataagc tgtcaaagtt tcaatttatt cagctTAATT ACCTCACTGT
GAGGTTGTGA GAAATGAATA ATACAGTAAA ATACTTAGCA AAGTGAGCTG CACACCATAC
CTACGCAATA GCAGTAGCTA TTGTTAATAA TGTGCTCGCC ctc
K
ccctctccct ctccctctcc ctctccctct ccccacggtc tccctctccc tctctttcca
cggtctccct ctgatgccga gccgaagctg gactgtactg ctgccatctc ggctcactgc
aacctccctg cctgattctc ctgccttagc ctgccgagtg cctgcgattg caggcgcgcg
ccgccacgcc tgactggttt tcttattttt ttggtggaga cggggtttcg ctgtgttggc
cgggctggtc tccagctcct aaccgcgagt gatccgccag cctcggcctc ccgaggtgcc
gggattgcag atggagtctg gttcactcag tgctcaatgg tgcccaggct ggagtgcagt
ggtgtgatct cggctcgcta caacctccac ctcccagccg cctgccttgg cctcccaaag
tgccgagagt gcagcctctg cccggccgcc accccgtctg ggaagtgagg agcgtctctg
cctggccgcc catcgtctgg
There is no frequency submission for ss19058863.
No sufficient data to compute Hardy-weinberg probability for ss19058863.
There is no individual genotype data for ss19058863.
| 
