| Submitter | | Handle | KWOK | | Submitter SNP ID | OVLP-000925-473720 | | RefSNP(rs#) | rs647812 | | Submitted Batch ID | OVLP-000925-5-0 | | Submitted Date | Oct 06, 2000 | | Publication Cited | [1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms | | First entry to dbSNP | Oct 6 2000 12:00:00:000AM |
| | Resource Links | | GenBank Accession | AL138784.17
AL365439.3
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | | Allele | | Observed Allele | C/T | | Ancestral Allele | | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | nonCpG |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AL138784 SequenceAccession1:AL138784 SequenceVersion1:17 SequenceContigName1:Contig3 SequenceContigPosition1:19524 SequenceLocalName2:AL365439 SequenceAccession2:AL365439 SequenceVersion2:3 SequenceContigName2:Contig5 SequenceContigPosition2:6250 PolyBayesConfidence:99 |
>gnl|dbSNP|ss1908816|allelePos=956|len=1872|taxid=9606|alleles='C/T'|mol=Genomic TTATCACCAA GAGCTATTAT TTTTCCCCAC TATTATGGAC TTGTTTTCTT CAATCTAAAT
CTCCCTTTTC AGGGAATTGT CCTTCTTCCA CTTGACATCC CAGTGGGGTG AGCATTCATA
GTGCCCTATA CTACATCTGA CTCCCATCCT GTTGTTACAC AGCTGGACAT GTGACCCAGA
CTGCACCAAT CACAGAACCA CATCCTCCTA AACACAGTAA TTGGTTCAAG AGTAGACACA
TGACCCAGGC AGAGCCAATC AGAATCTCTC CCCAAGCTCT AGTTTCAGGA TGCTTTAAGA
caagggtttc caacccccag gccatggact ggtaccagtc cctggcctgt taggaactgg
gctgcacagc aggaagtgag cggcaggtga gcaagtgaag cttcatctgt atttgcagct
gctccccatc acttgaatta ttgcctgagc tgcacctctt gtcagatcag tggtggcatt
agattctcat aggagggcaa accctattgt gaactgcacg tgtgagggat ccaggttgtg
gttcttatga gaatctaatg cctgaagatc tgtcactgtc tcccattacc cccacatggg
accgtctagt tgcaggaaaa catgctcacg gctcccactg attctacatg atggtgagtt
atataattat ttcattatat attacaatgt aatactaata gaaatgaagt ccacattaaa
tgtaatgcac ttgaatcatc ccgaaactat cagacccccc accccgtcct gacctgtgga
aaaattgtct tccacgaaac tggtccctgg tgccaaaaag actggggacA GTTGCTTTAA
CAGACCAGGC CTCTCTTCCT TTTGGATCAC CAATGGCCAG CAGCCATCCT TCCGGCCATG
TGGAGAAAGC CTTCAGTTAG CATACCAAGG GAAGCAGGAA CAAGAGGTGA AGACA
Y
Aggccaggag cagtggctca cgcctgtaat cccagcactt tgggaggcca aggcaggcgg
atcacctgag gccaggagtt caagaccagc ctgaccaaca tggagaaacc ctgtctctac
taaaaatgca aaaaaattag ctggacgtcg tggtgcatgc ctgtaatccc agctactctg
gaggctgagg caagaggatc gcttgaacct gggaggcaga ggttgcggtg agctgagatc
gcacaactgc actccagcct gggcaacaag agtgaaactc tgtctcaaaa aaaaaaaaaG
AGGTggccgg gcgcggtggc tcatgcctgt aatcccagct ctttgggagg ccaaggtggg
cagatcacga ggtcaggaga ttgagaccat cctggctaac atggtgaaac cccgtctcta
ctaaaaatac aaaaaattag ccgggcatgg tggcaggcac ctgtagtccc agctacttgg
gaggctgagg caggagaatg gtgtgaacct gggaggcgga gcttgccgtg agccgagatt
gcaccactgc actccagcct gggtaacaga gcgagactcc gtctcaaaaa aaaaaaaaGA
GGTGAAGACA GACACAGACC CTGACTGTTT CAGCCCCTAG ATCCAGCCGT GCCTGAAACT
GGTCCACTTA CATGAACTAA AAAATTCCTT ATTTTTCTTA TGGTTGTTTG CTTTGGTATC
TATCGCTTGG AGCTGAAAGC ATTCTGACAT AACCTCTTTG TGGTCCCAGA TTAAGAATGT
CTTTTTTCCT GGCAGCAACT TTCCCTTTTT TATGAAGCTG CCAATCAAGC TCTAGACCAC
CATGAGTGGC CCCTTGCAGC CTGAGTTGCT CAGCCAGAGA TGTTTGGTTG GAATTCATTA
GCCTAGGAGT GGTCTT
There is no frequency submission for ss1908816.
No sufficient data to compute Hardy-weinberg probability for ss1908816.
There is no individual genotype data for ss1908816.
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