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Submitted SNP(ss) Details: ss1909591           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000925-480590
RefSNP(rs#)rs631357
Submitted Batch IDOVLP-000925-5-0
Submitted DateOct 06, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPOct 6 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG Codec/!t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AL353647 SequenceAccession1:AL353647 SequenceVersion1:3 SequenceContigName1:Contig9 SequenceContigPosition1:2899 SequenceLocalName2:AL365439 SequenceAccession2:AL365439 SequenceVersion2:3 SequenceContigName2:Contig5 SequenceContigPosition2:4852 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1909591|allelePos=201|len=401|taxid=9606|alleles='G/C'|mol=Genomic
 TGCCTGGGAT CCCACCCCCG AGTCCAGGAT CTACGGTGTA GGGTACACCA GAGTGGGCAG
 TGCCTGCTCC AGCCCTGTGA CAACTTGGGG GAAGCTCGGG GCGGCCCCCA CTGCCCCAGG
 ATACCAGAGG CTGTGGAGCC CTGTGCCAGG GGCACAAACA AGGGGACGTG ACCACGGGCA
 TCTGCATCTC GGCAGGAGGA
 S
 GACCGCTACA GGCTCATGCT CAGTCGGAGC AACAGTGAAA ACATTGCCAG CAACTACTTC
 CGATCTAAGC GGGCCAGCCA GATCCTCAGC ACAGACGCCA GGAAGAGCCT CAGTGAGTGT
 CCCTCCCCTG TCCCCACCCT CTCCACACAA CTGGGAGAGG CGTGAAGGGG ATAGTTTTGA
 AGTCAGACAG GCCTGGGTTC

  Submitted Frequency for ss1909591 back to top
There is no frequency submission for ss1909591.


  dbSNP summary of Genotypes for ss1909591 back to top
No sufficient data to compute Hardy-weinberg probability for ss1909591.


  Submitted individual genotype for ss1909591 back to top
There is no individual genotype data for ss1909591.

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