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Submitted SNP(ss) Details: ss19122727           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuDD-200402.chr1.NT_077402.1_6434
RefSNP(rs#)rs12405900
Submitted Batch IDCSHL-HuDD-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUDD-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuDD101b19000140730020.R 232 68

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19122727|allelePos=201|len=438|taxid=9606|alleles='G/A'|mol=Genomic
 TTAGGAATGG GGAACCCAGA GCCTCACTTG TTCAGGCTCC CTCTGCCCTA GAAGTGAGAA
 GTCCAGAGCT CTACAGTTTG AAAACCACTA TTTTATGAAC CAAGTAGAAC AAGATATTTG
 AAATGGAAAC TATTCAAAAA ATTGAGAATT TCTGACCACT TAACAAACCC ACAGAAAATC
 CACCCGAGTG CACTGAGCAC
 R
 CCAGAAATCA GGTGGCCTCA AAGAGCTGCT CCCACCTGAA GGAGACGCGC TGCTGCTGCT
 GTCGTCCTGC CTGGCGCCTT GGCCTACAGG GGCCGCGGTT GAGGGTGGGA GTGGGGGTGC
 ACTGGCCAGC ACCTCAGGAG Ctgggggtgg tggtgggggc ggtgggggtg gtgttagtAC
 CCCATCTTGT AGGTCTGAAA CACAAAGTGT GGGGTGTCTA GGGAAGAAGG TGTGTGA

  Submitted Frequency for ss19122727 back to top
There is no frequency submission for ss19122727.


  dbSNP summary of Genotypes for ss19122727 back to top
No sufficient data to compute Hardy-weinberg probability for ss19122727.


  Submitted individual genotype for ss19122727 back to top
There is no individual genotype data for ss19122727.