NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss19123276           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuDD-200402.chr1.NT_030584.10_815394
RefSNP(rs#)rs6695710
Submitted Batch IDCSHL-HuDD-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUDD-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuDD101b19000144496084.R -348 68

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19123276|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 CCCTGCTGAG CCCCCTGCTG CTGGCCTGCG TTCCCAGGAG ACCTGCTTGC CGCTCCTGGC
 CCCTGACCTG CCTCCCCTCT CTCCCTGCAG GAGGTGTCCT GTGGGACCTG GAGAGCCCTC
 CCGTGTGCCT GACTGTGGGG CCCGGGCCTG TCCGCACCCT GTTGAGCCTG GAGGATGCCG
 TGTGGGCCAG CTGTGGGCCC
 Y
 GGGTCACTGT CCTGGAAGCC ACCACCCTGC AGCCTCAGGT ACTGCACTAT CCTTTGGCTT
 GTGGCCCTGG AGGCCTGCCT TCCTTTTGCT GACCCTTTCT TATGTCCACC CCGGCACCGC
 TTTCAGCTCC CAGTGGCATT CCAAGGATCG ATTGGGCAGA GTTTGTCCGG AAGCAGAGGG
 GGCCCAAGGT CCCTATTGGG

  Submitted Frequency for ss19123276 back to top
There is no frequency submission for ss19123276.


  dbSNP summary of Genotypes for ss19123276 back to top
No sufficient data to compute Hardy-weinberg probability for ss19123276.


  Submitted individual genotype for ss19123276 back to top
There is no individual genotype data for ss19123276.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement