Submitter | Handle | KWOK | Submitter SNP ID | OVLP-000925-374014 | RefSNP(rs#) | rs206018 | Submitted Batch ID | OVLP-000925-5-2 | Submitted Date | Oct 06, 2000 | Publication Cited | [1] A general approach to single-nucleotide polymorphism discovery [2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms | First entry to dbSNP | Oct 6 2000 12:00:00:000AM |
| Resource Links | GenBank Accession | AC009833.3 U89335.1
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| | Allele | Observed Allele | G/C | Ancestral Allele | | Allele Origin | N/A | SNP Class | SNV | CpG Code | c_g/!a |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC009833 SequenceAccession1:AC009833 SequenceVersion1:3 SequenceContigName1:Contig30 SequenceContigPosition1:2476 SequenceLocalName2:U89335 SequenceAccession2:U89335 SequenceVersion2:1 SequenceContigName2:Contig1 SequenceContigPosition2:37830 PolyBayesConfidence:97 |
>gnl|dbSNP|ss1955200|allelePos=4455|len=5206|taxid=9606|alleles='G/C'|mol=Genomic AATGTTCATA ATAAAAGGTT AAAAAATAAA ATAAAAAAGT GAAAAAAGAG GGTAGGTTAG
GGTATCTGTC TTGAGCCTTC TATCAAAAGT TGTGGTTCTg gccgggcacg gtggctcacg
cctgtaatcc cagcagtttg ggaggtcaag gcgggtggat cacttgaggt caggattttg
agaccagcct ggccaacatg gtgaaacccc atctctacta aaaatacaca catacacaaa
attagctagg tgtggtggca ggcacctgta atcccagcta ctggggaggc tgaggcaggt
gaattgcttg agcccgggag gtagaggttg cagtgagctg agattgcacc actacattcc
agcctgagtg acagagcaag actctgtctc aaaaaaaaaa aGCTGTGGTT CTatatctca
aaataataaa agccatatat gacaaaccca cagctaacat catattgaat ggggaaaagt
tgaaagcctt tcctctaaga tctggaacaa gacaaggatg ctcactttca ctatttttat
tcaaggtaat actggaagtc ctggccagag caattaggca ggagaaagaa ataaagggca
tccaaattgc aaaagaagaa ctcaaattat ccatgttcac agatgacata atcctatatt
tagaaaaacc taaagaaaac actggttata aacaaattca gtaaagctgt aggatacaaa
atcaatgtag aaaaagtagt agcatttcta tacgctaaca gcaaacaatc agaaaaagaa
atcaagaaag caatcccatt tataatagtt acaaaaaata aaaacaaatg aataaattta
accaaagaag tgaaagagta ctgcaatgac agctataaaa cattgatgaa ataaattgaa
gaggacacaa aaaaatggaa agatatcctg tgttcatgga ttggaagaat gaatactgct
aaaatgtctg tgcttaccaa agtgatctac agagtcatgc aacccctatg aaaataccaa
taatattctt tacagaaata gaaaaaacaa ccctaaaatt tatctgaact gtaaaagacc
caaatagcca aagcagtcct gagcaaaaag aacaaagcta gaggtaccac actacctaac
ttaaaaatat actataaagc tatagtaacc aaaacagcat ggtgctggca taaaaaacag
acacatagac caatggaatg taatagagag cccagaaaaa caagtccaaa catttaacag
ccaacttact ttcttttttc ttttctttcc tttttttttt tttgagatgg agtcttgctc
tgttgccagg ccggagtgca atggcacgat ctggctcact gcaacctcca cctcctgggt
tcaagcgatt ctcctgcctc agcctcctga gtagctggga ttacaggtgc gcaccaccat
gcctggctaa tttttgtatt tttagtagag acgggggttt cactatgttg gtcaggctgg
tctcgaactc ctgaccttgt gatctgccca cctcggtctc ccaaaatgct gggattacag
gcatgagcca ccactcccgg ccagccaact tactttcaac aaaggcacca agtacacaca
ctggggaaag gacactctct tcaataaatt gtgctgggaa aactggatat ccatatgcag
aagaaactaa acctaggccg ggcggggtgg ctcacgcctg taatcccagc actttgggag
gcggaggtgg gtggatcacc tgaggtcagg agtttgaaac cagcctgacc aatatggtga
aaccccatct ctactaaaat tacaaaaatt agccgggcgt agtggtgtgc acctgtagtt
ccagctactc aggaggctga ggcaggagaa tcagttgaac ttgggaggtg gaggttgcag
tgagctgaga tcataccact gcactccaga ctgggcaaca gggcaacaga gcaagactct
atcccccccc ccaaaaaaaa agaaaaaaag aaactaaatc tctatctgtc atcatataca
aaatagatta aagccttaca tgtacagctg gaaacttgaa gccactaaaa aaaaaattca
gccgggcacg gtgggtcaca cctgtaatcc tcaaacacaa ggtcaggagt ttgagaccag
cctggccaac atggtgaaac cccgtctcta ctaaaaatac aaaaaaatag ctgggcgtgg
tggtgggcac ctgtaaattc cagctatttg ggaggctaag gcaggagaat cgcttgaacc
caggaggcaa aggttgcagt gagtcaaatt tgcgccactg cactccagcc caggcgacgg
tgcaagactc cttctcaaaa aaaaaaaaaa aaaaaatcat ttgggaaatg cttcaagaca
ttggtctggg caaaagtttt ttgggtaaga cctcaacagc caggcaacaa aggcaacaac
agacaaatgt gattacatca agctaaaaag tgtctgtgca gcaaaggaaa caattaatgg
agtgaagagg caacctacag aatagaagaa aatatttgca aactgtctga caagggatta
ataatcagaa cgtataagga actcaacagc aaacaccacc actaccacca ccgacaaata
atgtggttta aaaaatgagc aaattatctg aacagacatt tctcaaaaga agacatacaa
atggccaaca ggtatatgga tgcaaatcag ggaaatgtaa atcaaaacca caatgagata
tcatctcaca ccagttaaag tggctattat tgaaaacaca agggccaagt gtggtggccc
atgcctgtaa tcccagcact ttcagaggtt gaggcgggaa gatcatttga ggtcaggagt
tcgagaccat cctggccaac atggtgaaac cccatctcta ctaaaaatac aaaaaattag
ccaagcatgg tggtccacgc ctgtgatccc agttacttgg gaggctgaag tacaagaatc
gcttgaatct gggaggcaga ggttgcagtg agctgagatc aagtcactgt gatccagcct
gggcaacaca gcaagactct gtctcagaaa aggaaaaaaa atgcaaaaaa tagcagatgc
tggcaaggat gcagagaaag gggaaccctc atacactgtt ggtgggaatg taaactaaca
cagccagtat ggagaaaagt atggaagttt ctcaaaaatt aaaaatagat ctaccatgtg
atcaatctac tgttcattac atatccaaag gaaatcagta tcttgaagag atatctgcat
ccccatattt attgcagcac tgttcacaat agctaacata tggaattaac tgaagtgcca
tcaacaaatg aatggaaaaa agaaactgtg tcatatagac acaatggaat attattcagc
cagaaaaaga atgaaatcct atcattttca gcaacatgga tgaaactgaa ggacattatg
ttaagtgaaa taagccaggc acggaaagac aaatattgca tgtctctcac cttcaccttt
gtgCCACTGC CTTAGTTAGT CCTGACCTTT CTTGCATTCC AGGTAGATAC TTGCATCAGC
CTCCTATTGC ATGTGTaata ttgctcctca ctcatatgtg ggagctaaaa aagttagtct
catggaagta gggtagaatg atggttacca gaggttagaa agggtggcag ggagggggag
atgaagagag gttggttaat ggatacaaaa ttatggtcat atagaaggaa taagttctag
tgttagatag cagagaagga tggtgatagt taacaatttg tatttcaaaa taactagaag
agaagatttg aaatgttctc aacacaaaga aatgatgttt gagatgatag atatcccaat
taccctgatt tgatcatgat acattgtatg catgtatcaa aatatcacat gtgtccaggt
gcggtggctc atacctgtaa tcttatcact ttggcaggct gagcgggtgg atcactttag
gtcaggagtt ctgagaccag cctgcccaac atggtgaaac cccatctcta ctaaaaatac
aaaaattagc caggcgtggt ggcgcgttcc tgtaatccca gctactcggg aggctgagac
atgagaactg cttgaacctg ggaggcgggg gtttcagtga gccaagatta tgccactgcc
cttcagcctg ggggatagag cgactctgtc tccaaaaacg agagagaaaa aaaaaaagaa
accaaaaaac tcacatgtac cccatagata cgtatgacta ccgtttgtca ataacaaaag
aaaATAAAAT GGCAACCACA CACACAAAAA AGTTGTGGTT CTGAGCATAT GAATCAGGCT
GCTTAGACTT GAATGCCAGC TTTGCCTCTC CTGGCTTAGT GACCTGGACC ACAAAGAAGA
GGCCCTAATC CAGC
S
TGGGGAGAAG TTAGGGACAT CTTCCTGAAG AAGATGCCTC CTGAACACCA GCCTGTGGAA
Gaggggttgg gaaggccatt ccaggtagtg tcaatagcag ggataaaggc tgagaggcaa
gaatcagtat ggggtacgtg gcaaagtcag cagcagtttc atgttgctgg agcagagagt
agaagggtgg gatggggaga gctgaggcct gagaggcagg cagggctggg tcatgcaggc
cttggacttt attcagaatg aggcgggcag cctccgaagg ttcagcaggg gagagacagg
tcaactggac attttcagta gagtaccctg gccacggggt aaaggctgaa cctatagaag
gacaagtgtg gaggcagaga ctgtagttag gaggctgatg caagtatcta tctggaacgc
aacaaaggtc aggactcagg cagtgggaca aagggtgaag gtgaaagcac agacttgaga
aaacttcagg agataaagtg gcatgacttt gtggttagtt gggtgtgtgg ggttaaaaaa
aataaaagga gGTGAAATGG ATACATTGGG TCTTCCCTCA GTCACTACTG TCTCTCCCAT
CCAGCCCACC CTTGTCTTTC CTCCCCCTTC TCCTGCAGAC CCTCTCACCT GGCAGAGATA
CCCACTGGGC TGGGCCATGC AGGTGGCCCC GTTCTGGCAA GGCCTGGACT CACATGGGTT
CACGTGATCC TGGCACAGGC TGCCTTGGAA T
There is no frequency submission for ss1955200.
No sufficient data to compute Hardy-weinberg probability for ss1955200.
There is no individual genotype data for ss1955200.
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