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Submitted SNP(ss) Details: ss19700901           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuDD-200402.chr7.NT_007933.13_54022625
RefSNP(rs#)rs2735842
Submitted Batch IDCSHL-HuDD-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUDD-200402
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuDD21b19000140882484.R 144 68HuDD21b19000143800476.R 395 68

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19700901|allelePos=201|len=701|taxid=9606|alleles='A/G'|mol=Genomic
 GTAACCCACC TTCTGTCCCA CCCCTTCCTG CTGCAGGTGG ATGGGGACTC TGTGAGTGGG
 ATTTGTTTTG TGGGCTACAA GAACTACCGA TACCGTGCGG GCTTCGTGCT GGCCCCAATC
 GGCCTGGTGC TCATCGTGGG AGGCTACTTC CTCATCCGAG GTGAGTGAAG ACCAGGCCAG
 GACCAGTTGG GCAACAAAAT
 R
 TACTGGGCAC TTGCTGCCAG TACTGGGAGC TGCCAGCACG GCTGCCCCCA TGCTGAAACC
 CCAGCTAGCT CCTATAGGGC CTTCACACAG TAGAAGGTGA CCCTCTAGGC AGACGAAACA
 CCGTGAGCAC TTGCTGCGGG ACAGCACCTT TGTACTGGCC AGAAAAATCC ATCCCTCTCT
 CCAGGGCCTT GGCCCAGGGC TCACAGCTTG ttttttttgt ttgtttttgt ttttgagaca
 gagtctagct ctgttgccca ggctggagtg cagtggcaca atcttggctc actgcaacct
 tcgcctcctg ggttcaagtg attctcctgc ctcagcctcc cccatagcta aaattacagg
 catgcaccac cacgtctggc taatttttgt atttttagta gagacggggt ttcaccatgt
 tagccaggct ggtcttgaac tcctgaccta aagtgatcca ccacctcagc ctcccaaagt
 gcggagatta caggcatgag

  Submitted Frequency for ss19700901 back to top
There is no frequency submission for ss19700901.


  dbSNP summary of Genotypes for ss19700901 back to top
No sufficient data to compute Hardy-weinberg probability for ss19700901.


  Submitted individual genotype for ss19700901 back to top
There is no individual genotype data for ss19700901.

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