NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss197885462           
Submitter
HandleBUSHMAN
Submitter SNP IDBUSHMAN-chr1-766984
RefSNP(rs#)rs2980319
Submitted Batch IDBUSHMAN1
Submitted DateFeb 16, 2010
Publication CitedN.D.
First entry to dbSNPFeb 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodBUSHMAN_METHODS
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss197885462|allelePos=201|len=401|taxid=9606|alleles='A/T'|mol=Genomic
 TACTCACATT ACCTGGAACT TCTTGGAAAT TCAGAATCTC AGGCCCCAAC CCAGACGGAC
 TGAATCAAAA TCTTCATTGT GGTAAGACCC TCGGTGACAC ACAGGCCTGG GAAGCACAGG
 TTAGCGTGTC ACCTTGGGCA AAGCTCTCAG CATTGTGAGC CTCTGTTTTC TACTCTGTAA
 AGGAGGCATG AATATCTACA
 W
 CATCAGTTTG CCATGAGTAT TGAAAAATAA TGTCTTAGAA GCACAGGGCA GAGCCTGGCA
 TGTAGTTTGT GCTCAGTGCA CAGCAGACAA GAAACCACAT GCACCAGACC TGGGCGGCCG
 TCGGCAGCCC ACCCTGAGCA ACCATGGGTG GCCCTCTTGT CTCTCGGGAC AAGAAATGCT
 TCTTTAGAAA TGCTTCTTTC

  Submitted Frequency for ss197885462 back to top
There is no frequency submission for ss197885462.


  dbSNP summary of Genotypes for ss197885462 back to top
No sufficient data to compute Hardy-weinberg probability for ss197885462.


  Submitted individual genotype for ss197885462 back to top
There is no individual genotype data for ss197885462.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement