NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss197924586           
Submitter
HandleBUSHMAN
Submitter SNP IDBUSHMAN-chr1-3694880
RefSNP(rs#)rs9424282
Submitted Batch IDBUSHMAN1
Submitted DateFeb 16, 2010
Publication CitedN.D.
First entry to dbSNPFeb 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBUSHMAN_METHODS
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss197924586|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 GGGGCAGGCA CTGCGAGCAA ACCCTTCTGT CCCAGCTTCC TCTAGGGCTG GAGGAAGACC
 CTGCTCAGGA TGCAAAGCCT GACCCTCGGG GATCTCTGGC AGCCTCGGTG CCGGCTCTGC
 CCCCAGAGAG GAGGCAACAG CATGTGGGCC CCCTGGAAGC CAGCACTCGC CCTTGGTCAG
 TGTGGCTGGT GAGTCCTAGT
 Y
 ACACTGGGTG TGGAGGAGAC AGGTAGGGCT GGACTTGATA GACTCTGAAC AGAGTTGGGG
 ATGGGCTGAT TACTCAGAGG ACACCTCCTG CTTCGCCTGG AATGGATGGC AGGGGTGATG
 GAATTTCTCA AGCCCCAAGT TGTGAAGGAA ATGAAAAAAG GAACCTGCTG GAATCCTCCG
 GCTCAAGCAA TCAAGCTGCT

  Submitted Frequency for ss197924586 back to top
There is no frequency submission for ss197924586.


  dbSNP summary of Genotypes for ss197924586 back to top
No sufficient data to compute Hardy-weinberg probability for ss197924586.


  Submitted individual genotype for ss197924586 back to top
There is no individual genotype data for ss197924586.