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Submitted SNP(ss) Details: ss19833924           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuFF-200402.chr1.NT_004559.11_2727118
RefSNP(rs#)rs747657
Submitted Batch IDCSHL-HuFF-200402
Submitted DateFeb 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUFF-200402
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuFF101b19600401274837.F -730 28HuFF101b19600401639159.F 325 62

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19833924|allelePos=201|len=401|taxid=9606|alleles='G/C'|mol=Genomic
 TCAGGACAGC AAGCCCCCGG CTTCTGTGCT GTCCAGGGTG CCTCGGGCTG TAGCAACAGC
 TTTGGAAACA CTTTACCTTT GACACTGTGC TTGCCCTTGG GTAACTTGCT GATATGTGAA
 GCGTGCTTCA GTTCATACCT ATTCAAAAGA GGACAGTCTC AGAAGAGGCC TTCACACTGG
 GCTCTCGAAA CCAACAGTTT
 S
 ATTAGGAGAA TAAGATCAGA TACAGAGATG AGATAAAAGT CCACAAAACC CAGACCATCT
 AAACTGCTCA GGCTCCCTCC TGAGTTTCTG GAACTGTTCC AGAACCTGAA ACTGCAGTTG
 CGGCTGAACA TAGTTTGTGC CCAGCGATCA CTGCTATGGG GCCATTTTCA AGGCAAGGCC
 CTATTTGGAG TGGTGGTCAG

  Submitted Frequency for ss19833924 back to top
There is no frequency submission for ss19833924.


  dbSNP summary of Genotypes for ss19833924 back to top
No sufficient data to compute Hardy-weinberg probability for ss19833924.


  Submitted individual genotype for ss19833924 back to top
There is no individual genotype data for ss19833924.

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