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Submitted SNP(ss) Details: ss19871287           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuFF-200402.chr1.NT_028050.13_5474510
RefSNP(rs#)rs273882
Submitted Batch IDCSHL-HuFF-200402
Submitted DateFeb 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUFF-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuFF101b19600401781078.R 104 48

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19871287|allelePos=224|len=424|taxid=9606|alleles='T/C'|mol=Genomic
 GTATGTGAAA TGCAGTGTGA GAAACAAATG AGAAAATTCA GACTTGTGAG AAGATTGTTT
 TGTTTTTTTT CTGTGCTTAG CCTTGGCGAA AAATCTGAGA AAACTTAAAA TATATAACAC
 TGGAGTGACA ATCAGGAAGA GTGGACTCtt ttttttttta atttttttaa aCAAATTAGG
 GAAGTAAGTT CAATGGCTAG TGGTTATCAT AATAAGAAAA ATT
 Y
 AAGGAAGTTA TAGGTAAAAT AAGAATTTTA CTTTTGTTTC TTTTCTGAAT GGTACCTCAT
 ATTTTGACAG CATTATCCTT TTCAGATCTG TTTTATATTT AATTGGTTTA TTATACATGT
 AAGTATGATT AGATTCATGG ATTTAACCAG TTCTTTGTAT CTTCTGTGTC AAAATGTATA
 CTGTAGTATA CTGTTTATAT

  Submitted Frequency for ss19871287 back to top
There is no frequency submission for ss19871287.


  dbSNP summary of Genotypes for ss19871287 back to top
No sufficient data to compute Hardy-weinberg probability for ss19871287.


  Submitted individual genotype for ss19871287 back to top
There is no individual genotype data for ss19871287.

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