NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss200334558           
Submitter
HandleBUSHMAN
Submitter SNP IDBUSHMAN-chr9-33103120
RefSNP(rs#)rs869
Submitted Batch IDBUSHMAN1
Submitted DateFeb 16, 2010
Publication CitedN.D.
First entry to dbSNPFeb 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBUSHMAN_METHODS
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleA/T/C/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss200334558|allelePos=201|len=401|taxid=9606|alleles='A/T/C/G'|mol=Genomic
 GCACAGTGAT TGCAGTGGTT GCATACCACT GAAAGAAGGG GGTGGGGGGA GGACGTAACA
 TTAAGAATGG TTGAAATTTT GTGTTTTTCT GTTAAATTAC AACTACCAAA AAGATCACAC
 CAATCCAATT TTAGCAGCAC TCTCCGAATT TTCACGAATA AGAAAACCAT AATTTAAAGA
 AAAATTCTAA CCTATTTCAC
 N
 ACAATTTAGC AATTCTATCA CCGGGAATGT GTTCCACGGC CACCAAATTT TGGGATGTGT
 ACAGTTCTGA CTCTGGGGTG ACACTGCGAA CACATCAAGA AACCCGCAAA GGCATAAACA
 CCTTGCAGAG CTAAGAATTC ACATGCCGAG CCAAGTTGGG GGCAAAATAT CCCACTCGTC
 CTGGTCATCT GGAAAGCCAT

  Submitted Frequency for ss200334558 back to top
There is no frequency submission for ss200334558.


  dbSNP summary of Genotypes for ss200334558 back to top
No sufficient data to compute Hardy-weinberg probability for ss200334558.


  Submitted individual genotype for ss200334558 back to top
There is no individual genotype data for ss200334558.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement