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Submitted SNP(ss) Details: ss20140860           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuFF-200402.chr22.NT_011520.9_20387527
RefSNP(rs#)rs133074
Submitted Batch IDCSHL-HuFF-200402
Submitted DateFeb 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUFF-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuFF101b19600401763156.F 179 43

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss20140860|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 TACTGACTGG GTTTGTTTAA AGTCAGGCAG GGCTGGAGTG AGCAGCCAGG GCCATGTTGC
 ACAAGGCCTG AGAGACGGGA AAGGGCCCGA TCGCTCTTTC CCGCCTCTCA CTGGTGCGAT
 GGAAGGTGGC CTTTCTCCCA AGCTGGTGGA TAATGAAAAA TAAAGCATCC CATCTCTCGG
 CGTTCCAGCA TCCTGTCAAT
 Y
 TCCCTTTTGC TCTAGAGGAT GCATGTTTAT TTGAGGGGAT GTGGCACTGA GCCCACAGGA
 GTAAAAGCCC AGTTTGCTAG GAGGTCTGCT TACTGAAAAC AAGGAGACCT GGGGTGGGTG
 TGGTTGGGGG TCTTAAAACT AATAAAAGCT GGGGTCGGGG GGCTTTTGCA GCTCTGGTGA
 CATTCTCTCC ACGGGGCACA

  Submitted Frequency for ss20140860 back to top
There is no frequency submission for ss20140860.


  dbSNP summary of Genotypes for ss20140860 back to top
No sufficient data to compute Hardy-weinberg probability for ss20140860.


  Submitted individual genotype for ss20140860 back to top
There is no individual genotype data for ss20140860.

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