Submitter | Handle | CSHL-HAPMAP | Submitter SNP ID | CSHL-HuFF-200402.chr7.NT_007819.14_24311570 | RefSNP(rs#) | rs158 | Submitted Batch ID | CSHL-HuFF-200402 | Submitted Date | Feb 21, 2004 | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 21 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_007819
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CSHL-HUFF-200402 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position qualityHuFF101b19600401184956.F 446 43 |
>gnl|dbSNP|ss20317745|allelePos=225|len=593|taxid=9606|alleles='C/T'|mol=Genomic ACAGGTTAAC CTGCTGGACC CTCAATTTCC CATCTGGTTA AAAATACCTA GCTAACAGAC
TTCTGTAAGT TTAATGCGGT AATGTACAAA AGTTCCTAGT ATTGCTATTT GTTAATTTTC
CCAACAGTAA AAAAAGGATA AAGATGAAAA TCAAAATCAG CTATGAAATC CTCATTCCTC
ATATTTACAG AGAAGGTTTC ATTTATTCAT TCTATAAATG TTTA
Y
TGCAAACCTA CTGCGTGTTC TTGACACAGG GGATCAAGTG ATGAACAAGA CAGACAAGGT
CTCTGCATTC CTGGTACTTA CATCCTAATG AGGGAAGGCA GATAACCCAA TAACCCAAAG
AGACAATTTC AGAGAGAAAT TTAAGTGCTA TGAGCAACAG CAAACGGGTG ATGTGGCTTG
GCTGGAGGGG ATGGTCATTT AGCTTGGATG CATAAGAACC TAGGCCTGCT TGACTGATCT
CCTTTAGCCA AGTATAGTCC TTTAGCCAAG GACCTCACCT TGTATGATAC TTGCGGGGTA
CAGTGCAGAT GATGAGAAGC CAGGCCTTCG CTTTCACCCA TCTGTGGAAG TATCTCTTTT
GCAGCTGT
There is no frequency submission for ss20317745.
No sufficient data to compute Hardy-weinberg probability for ss20317745.
There is no individual genotype data for ss20317745.
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