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Submitted SNP(ss) Details: ss20317745           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuFF-200402.chr7.NT_007819.14_24311570
RefSNP(rs#)rs158
Submitted Batch IDCSHL-HuFF-200402
Submitted DateFeb 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUFF-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuFF101b19600401184956.F 446 43

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss20317745|allelePos=225|len=593|taxid=9606|alleles='C/T'|mol=Genomic
 ACAGGTTAAC CTGCTGGACC CTCAATTTCC CATCTGGTTA AAAATACCTA GCTAACAGAC
 TTCTGTAAGT TTAATGCGGT AATGTACAAA AGTTCCTAGT ATTGCTATTT GTTAATTTTC
 CCAACAGTAA AAAAAGGATA AAGATGAAAA TCAAAATCAG CTATGAAATC CTCATTCCTC
 ATATTTACAG AGAAGGTTTC ATTTATTCAT TCTATAAATG TTTA
 Y
 TGCAAACCTA CTGCGTGTTC TTGACACAGG GGATCAAGTG ATGAACAAGA CAGACAAGGT
 CTCTGCATTC CTGGTACTTA CATCCTAATG AGGGAAGGCA GATAACCCAA TAACCCAAAG
 AGACAATTTC AGAGAGAAAT TTAAGTGCTA TGAGCAACAG CAAACGGGTG ATGTGGCTTG
 GCTGGAGGGG ATGGTCATTT AGCTTGGATG CATAAGAACC TAGGCCTGCT TGACTGATCT
 CCTTTAGCCA AGTATAGTCC TTTAGCCAAG GACCTCACCT TGTATGATAC TTGCGGGGTA
 CAGTGCAGAT GATGAGAAGC CAGGCCTTCG CTTTCACCCA TCTGTGGAAG TATCTCTTTT
 GCAGCTGT

  Submitted Frequency for ss20317745 back to top
There is no frequency submission for ss20317745.


  dbSNP summary of Genotypes for ss20317745 back to top
No sufficient data to compute Hardy-weinberg probability for ss20317745.


  Submitted individual genotype for ss20317745 back to top
There is no individual genotype data for ss20317745.

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