NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss20429351           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr1.chr1.NT_004487.16_17373646
RefSNP(rs#)rs12021506
Submitted Batch IDWGSA-200403-chr1
Submitted DateMar 18, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 18 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01010820.1 10001

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss20429351|allelePos=501|len=1001|taxid=9606|alleles='G/T'|mol=Genomic
 ccatgatgcc caggctgtct ccactgagag gcatctgcag ccctgagcca ggccacctca
 atgccctggg gcctcctcct gtgctcatgt ggcacccaaa gtctgaaggg ggctgaggtt
 gcaggggact gttgtggcag cgctgccttg agcacatgca cacctggctg agttgtggca
 gcacctaggc ttcgccacaa ctttgctcta ccccagagtg ggcactagga gcagagagag
 gtcaggagca ggagcaaaca ttttcaagcc tgtgggggca gagtttttcc tgggtccccc
 aagaacacag ggatgctggt gtctggagcc gtggctgtgt ggctgaggct atacctagga
 gtgcaggctc ctgccctgcc aacccagtaa ggggtggggc tcttacctgt acttggctcc
 caccagctct gtggagcgct cagccccagc tgtgccttcc gtgctgcagc cAGCATCCTC
 ACAAAGGCAT CTCCAGAAGG
 K
 CCATCACTGC CATCAATAGG ATCAAATtta tatgaaattt agaaaaagta caactattga
 gttggaaaat agatcagttg ttgtcgggag ttgggagagg ggatagtgat tgactacagt
 gggcaatgtg ggggaaactt tagcatgaaa taaccgttct ataaggtact ggaatggtgg
 atacatagct ctatgtcttt atcataactc ttagaacagc atatcacaaa gaatatacct
 tattttatgc aagctaaaaa aaatcagcca gaatgtctag ggatccctgg atgaaataca
 gactgtgcca gataaatgta actatgtttc aaatgtatga aaaacaacct tactgaatga
 agtagtaggg aggagaggtg gagagggaag gaaagaagct gatcaaagta acttggtaaa
 cacagagttt cgatggggat ttcaaggcta aaggccaaaA ATATAATGTG TATATACTAC
 CAGCTGGTGG GCTCTTGTAT

  Submitted Frequency for ss20429351 back to top
There is no frequency submission for ss20429351.


  dbSNP summary of Genotypes for ss20429351 back to top
No sufficient data to compute Hardy-weinberg probability for ss20429351.


  Submitted individual genotype for ss20429351 back to top
There is no individual genotype data for ss20429351.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement