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Submitted SNP(ss) Details: ss20470091           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr1.chr1.NT_077913.2_91394
RefSNP(rs#)rs9442380
Submitted Batch IDWGSA-200403-chr1
Submitted DateMar 18, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 18 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01000037.1 10817

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss20470091|allelePos=438|len=677|taxid=9606|alleles='T/C'|mol=Genomic
 GCTACCCCCG GGGCCTCCGC TCACAGCAGC CACTTCTGCC ACCAGCAAGA CATCAACAAA
 GGTCACTGGT GGGACTTTAA ATACACAttt aaatagactt tttatttcta ataatttctg
 atcaacagaa aagttgcaca gGGGTTTCAA AGATCACAGA GACCTGGCGT CACTGTGAGA
 CCCGCACGTC AGCTGGTCCG TCTGTCGCAG CAGCCAGTGA TGACCAGCAG CTAAACCCCA
 CACGCTGGCC AGCCTTTTTC CCTCCTGTCC TTTCCGTCCC AGAACCCCAT CCAGGCCCCG
 TGGCCTCGTC ACctctcctt ggtctgtgac agcttctcag actttccttg gtttagcaac
 cttgacagtt ttgaggagtg ctgctcaggt gttttgtaga gagtccctca gtttgggttt
 gtctgatgtt tttctca
 Y
 gattatactc tggggttatg ggttttgcga agaggaggaT GGAGTCCTAA GTTCCAGAGC
 CCAGTGTCCC ATCACCCCAT TGAGTCCGGG TTCCAGGCTC TCCACACAAC CCAGCTCTAT
 CATCCCATCG GGGATCCACG CTCTCCACAC GACCCAGCTC TATCATCCCA TCGGGGATCC
 AGGCTCTCCA CACAACCCAG CTCTATCATC CCATCAGGGA TCCACGCTCT CCACACGAC

  Submitted Frequency for ss20470091 back to top
There is no frequency submission for ss20470091.


  dbSNP summary of Genotypes for ss20470091 back to top
No sufficient data to compute Hardy-weinberg probability for ss20470091.


  Submitted individual genotype for ss20470091 back to top
There is no individual genotype data for ss20470091.

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