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Submitted SNP(ss) Details: ss2047274           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000925-372497
RefSNP(rs#)rs203674
Submitted Batch IDOVLP-000925-3-2
Submitted DateOct 06, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPOct 6 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AL049744 SequenceAccession1:AL049744 SequenceVersion1:8 SequenceContigName1:Contig1 SequenceContigPosition1:56838 SequenceLocalName2:AL161735 SequenceAccession2:AL161735 SequenceVersion2:8 SequenceContigName2:Contig2 SequenceContigPosition2:65659 PolyBayesConfidence:97

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2047274|allelePos=201|len=401|taxid=9606|alleles='C/A'|mol=Genomic
 TCATAACCAT CATGGCATTC ATAGTCCAAT GTGTCATTCA GCTTAAACCA TGTGAAGTCA
 TTTTTAGTTC TGGCATTCAT AAATACTGGG ATATCACAAG ATTCTAGTGC ATAAAAAATT
 TAGAATGTCA TTTCTAATGT CATCTAATAA ACAATCTGAG TATTTCCCAT TCTAAGAAGA
 AAAAGCTTTA TTGATTAGAT
 M
 TACTAATAAA TAGGTACCGT ACAAAAATAA TCTATGACTG GTGAGAATTT GTTGTCGTAA
 AATAGTTGTC AAAAGTGAAA GTATATCTTT CTACACAACA TTTTTTTTCA TTGCTTAAGC
 CCCAAAATAT ATTTTAAAAA CATTTTTCTT AATTCATTTA TACTAAAGCA TTTATGACAA
 TGCTAGTAAT AAAACAGGCC

  Submitted Frequency for ss2047274 back to top
There is no frequency submission for ss2047274.


  dbSNP summary of Genotypes for ss2047274 back to top
No sufficient data to compute Hardy-weinberg probability for ss2047274.


  Submitted individual genotype for ss2047274 back to top
There is no individual genotype data for ss2047274.

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