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Submitted SNP(ss) Details: ss2048851           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000925-423199
RefSNP(rs#)rs229526
Submitted Batch IDOVLP-000925-3-2
Submitted DateOct 06, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPOct 6 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/!a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC008048 SequenceAccession1:AC008048 SequenceVersion1:11 SequenceContigName1:Contig1 SequenceContigPosition1:24617 SequenceLocalName2:Z82188 SequenceAccession2:Z82188 SequenceVersion2:2 SequenceContigName2:Contig1 SequenceContigPosition2:33813 PolyBayesConfidence:97

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2048851|allelePos=363|len=563|taxid=9606|alleles='G/C'|mol=Genomic
 GAGGGGCTTC ATCCTTCCAA GGCCTGTGTG GAGCAGAAGC CTCCATGGAC TGGGTGCCCG
 GAGACTCAGC ATGCAGGCCC TGCCCTGCCA GTCTCCTCCC gatcttgggg aacttgctgc
 tctgtggagg tctcagtctt cttgtctgat agatggggac aataaCCTTC CCTCTGGAGT
 TAGGTCAGGA GTGCTGTGGC TGGAGGACGC AGCACCCGCC CACCCCAGGC ATCGGCACAT
 AGTAGATGTT GAGTGAAGTA TAGTTCCTGT CCCTCCTTCC TTGTTCCAGG TCACCATGGG
 GACAGCCGCC CTGGGTCCCG TCTGGGCAGC GCTCCTGCTC TTTCTCCTGA TGTGTGAGAT
 CC
 S
 TATGGTGGAG CTCACCTTTG ACAGAGCTGT GGCCAGCGGC TGCCAACGGT GCTGTGACTC
 TGAGGACCCC CTGGATCCTG CCCATGTATC CTCAGCCTCT TCCTCCGGCC GCCCCCACGC
 CCTGCCTGAG ATCAGACCCT ACATTAATAT CACCATCCTG AAGGGTGAGT GCCCTCCTGT
 GGGGCCTGGT AGTGGGCAGG

  Submitted Frequency for ss2048851 back to top
There is no frequency submission for ss2048851.


  dbSNP summary of Genotypes for ss2048851 back to top
No sufficient data to compute Hardy-weinberg probability for ss2048851.


  Submitted individual genotype for ss2048851 back to top
There is no individual genotype data for ss2048851.

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