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Submitted SNP(ss) Details: ss20492342           
Submitter
HandleSSAHASNP
Submitter SNP IDWGSA-200403-chr1.chr1.NT_077913.2_69007
RefSNP(rs#)rs4072537
Submitted Batch IDWGSA-200403-chr1
Submitted DateMar 18, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 18 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGSA-200403
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence positionAADD01000035.1 9213

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss20492342|allelePos=201|len=678|taxid=9606|alleles='T/C'|mol=Genomic
 CGAGAGGAAG CAGAAGAGGG GAAAAGGCCG ATTATCGTAG AAGAGTTAGG AAAATCAATC
 AAAGATACCC CCTTGAGAAC AGTTAAGTTC ACAGCTGTGA GTTCTGGAAA CCTTTATGTT
 TTAAAAATGA TTCCGAGGAC TCAGAGGGTA AAGCTCGCAC CAACTTAATT TGTTATTGCC
 TTTTCTATCA AAGTTATGCT
 Y
 GTGGCCGGAC ACAGTGGTTC GCAtttggga ggtcaaggcg ggcggatcac ttgaggtcag
 gagttcgaga caagcgtggt cagcatgatg aaaccctgtc tctactaaaa atacaaaaaa
 attagctgga tgtggtggcg ggcacctata attccagcta ctctggaggc tgaggcagga
 caatcgcttg cacctggaag gcggaggttg cagtgagctc agatggcacc attgccctcc
 agcctgggca acagagtgag actctgtctc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
 CCAGTTATGC CTGTAGGTTG CTTGAGAGTC AAACACTTCT GCAAGGCTTG GACACATATG
 ATCTTCAGGC CGCGCCGAGG CCACCAGCTC CGTGTGCTGG GAGGCTCCTG TGTTTACTTC
 CAACGTCACT GGCAAACGGC AGCTTCTCAG CACTCCAGCT TCAGGGTCAG CCCTGAA

  Submitted Frequency for ss20492342 back to top
There is no frequency submission for ss20492342.


  dbSNP summary of Genotypes for ss20492342 back to top
No sufficient data to compute Hardy-weinberg probability for ss20492342.


  Submitted individual genotype for ss20492342 back to top
There is no individual genotype data for ss20492342.

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