>gnl|dbSNP|ss20575722|allelePos=201|len=701|taxid=9606|alleles='T/C'|mol=Genomic
CCCTCTGCAT TCACGTCAAG CTGTGCAGGG AATGCTAAAC AGAGGCAGAT CTAAACTTAG
GAGTTAGGCT TCTTCTCCAT GGAGATGTGG ATCTGCACAG ACAAAGTGTC CAAGTGGGAT
TTTCCTGCTA TTTCAAGGAC TGCTGCTGCA CCCTGCTGGC TCTTCCTGCA CTCCCTGCCT
CCAGGAATGA CTGTGTCTCT
Y
TGAGTTAGTG AAGTCATCAA CTTTTTTTTT TAAATCtctt attattatta ttatacttta
agttttaggg tacatgtgca cattgtgcag gttagttaca tatgtataca tgtgccatgc
tggtgcgctg cacccactaa ctcgtcatgt agcattaggt atatctccca gtgctatccc
tcccccctcc ccccacccca caacagtccc cagagtgtga tgttcccctt cctgtgtcca
tgtgttctca ttgttcagtt cccacctatg agtgagaaca tgcggtgttt ggttttttgt
tcttgcaata gtttactgag aatgatgatt tccaatttca tccatgtccc tacaaaggac
atgaactcat cattttttat ggctgcatag tattccatgg tgtatatgtg ccacattttc
ttaatccagt ctatcgttgt tggacattcg ggttggttcc aagtctttgc tattgtgaat
aatgccgcaa taaacatacg
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 220 | 220 | C=0.86818182
| T=0.13181818 | C/C=0.75454545
C/T=0.22727273
T/T=0.01818182
| Pr(chiSq=0.005,df=1)
=1.000 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 84 | 84 | C=0.71428573
| T=0.28571430 | C/T=0.52380955
C/C=0.45238096
T/T=0.02380952
| Pr(chiSq=3.372,df=1)
=0.100 | Genotype
Freq. |
| HapMap-JPT | 168 | 168 | C=0.67261904
| T=0.32738096 | C/C=0.47619048
C/T=0.39285713
T/T=0.13095239
| Pr(chiSq=0.979,df=1)
=0.343 | Genotype
Freq. |
| HapMap-YRI | 222 | 222 | T=0.91441441
| C=0.08558559 | T/T=0.84684682
C/T=0.13513513
C/C=0.01801802
| Pr(chiSq=2.072,df=1)
=0.150 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | T=0.72448981
| C=0.27551019 | T/T=0.55102038
C/T=0.34693879
C/C=0.10204082
| Pr(chiSq=0.840,df=1)
=0.371 | Genotype
Freq. |
| HAPMAP-CHB | 78 | 78 | C=0.80769229
| T=0.19230770 | C/C=0.61538464
C/T=0.38461539
| Pr(chiSq=0.769,df=1)
=0.403 | Genotype
Freq. |
| HAPMAP-CHD | 162 | 162 | C=0.79629630
| T=0.20370370 | C/C=0.65432101
C/T=0.28395063
T/T=0.06172840
| Pr(chiSq=1.260,df=1)
=0.273 | Genotype
Freq. |
| HAPMAP-GIH | 174 | 174 | C=0.78735632
| T=0.21264368 | C/C=0.62068963
C/T=0.33333334
T/T=0.04597701
| Pr(chiSq=0.002,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-LWK | 178 | 178 | T=0.84831458
| C=0.15168539 | T/T=0.71910113
C/T=0.25842696
C/C=0.02247191
| Pr(chiSq=0.002,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | T=0.77272725
| C=0.22727273 | T/T=0.56643355
C/T=0.41258740
C/C=0.02097902
| Pr(chiSq=4.362,df=1)
=0.050 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | C=0.91477275
| T=0.08522727 | C/C=0.85227275
C/T=0.12500000
T/T=0.02272727
| Pr(chiSq=3.462,df=1)
=0.100 | Genotype
Freq. |
