NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss208828401           
Submitter
HandleBCM-HGSC-SUB
Submitter SNP IDBCM_CMT_1011-3283836
RefSNP(rs#)rs715494
Submitted Batch IDBCM_CMT_snps_submission_20100308
Submitted DateMar 15, 2010
Publication CitedN.D.
First entry to dbSNPMar 15 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBCM_CMT_1011_METHOD
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
chr22,28112433,+,intron,NM_145730

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss208828401|allelePos=251|len=501|taxid=9606|alleles='A/C'|mol=Genomic
 GTGGCCAGTA TTATTTTAGA ACTGAGGTAA AGGAGGGCCA GCCTATGTCA ACGGTCCAGG
 TCAGGTCACA CTGCCAGGAA GCTGCTGAGC TGGGGTTGAA CCCAGGGCTG ACTGACTGGG
 AGTCTGGTGA TCTTTCCATC ATACCTCTGG GCTCTTGAAG CAGCTCAGGG TGAAGCCTCC
 ACTGACCTAC ACTCAACAGA TGATCTTCAC ACAATCTCTG AGGGATCTGA CTCTTTGAGA
 CCTACTGAAG
 M
 TGCTCCTCAT GACAGTTTCT AAGAGGTCAG AGGAGACTGG TGGGCTCAAC TCAGGACAGA
 AAACCAGAAG CTCTGAGCTC TGCTCATGTT CCTACCCTCT GTGACAAGTT GCTTCATCTC
 AAATCCTCCC TTGGAAGGAT GGGAATATAA GGTGACAATA TTAAGTTTCT GTGAATTCAA
 TGGAACTAGG AGAATAGATC ACACAGCTTA AAAAAAAAAG GTATTACAGT AATATTTATA
 TACAGCTTTC

  Submitted Frequency for ss208828401 back to top
There is no frequency submission for ss208828401.


  dbSNP summary of Genotypes for ss208828401 back to top
No sufficient data to compute Hardy-weinberg probability for ss208828401.


  Submitted individual genotype for ss208828401 back to top
There is no individual genotype data for ss208828401.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement