NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss211380120           
Submitter
Handle1000GENOMES
Submitter SNP IDYRI.trio.3.2010_1150456_chr13_28122208
RefSNP(rs#)rs7329410
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPMar 29 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:178

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss211380120|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 TTAAGAGACA AGAAAAAGCG TCACCTTCTT GCATACTTGA AAGTAAGAGA AAAACCAATT
 ATGGTTGAAT GGAGATAAAC ATCTATTGCA TAGGTGTCAT TTTCTAGGAT TTCTCAATCT
 CGCCAACTTA ACAAAAAAAT ATTGCGATAC ATGGTATTAG TGATCAAAAT ATTTGCTGCC
 CTTCAAGTTG AAAGAGTACT
 R
 ATCCTATCTC ACTGGTTATT TCTTAGGTGT CAGGCTTGGC ATTGTGACTT GAAGGGCCCT
 TCCTTGTGGA GAACATAGGC ATCCCGGATG CTTCAATGTC GGATATGGGC ACTTCTTGCT
 TTGGCTTATA AAGTGTGGGG GAAGTGATGT GTGACACTTC CTGGCAGGAG CTTTCAGAAC
 CAGTAGATGC TATACTTTGA

  Submitted Frequency for ss211380120 back to top
There is no frequency submission for ss211380120.


  dbSNP summary of Genotypes for ss211380120 back to top
No sufficient data to compute Hardy-weinberg probability for ss211380120.


  Submitted individual genotype for ss211380120 back to top
There is no individual genotype data for ss211380120.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement