NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss211539163           
Submitter
Handle1000GENOMES
Submitter SNP IDYRI.trio.3.2010_1230133_chr14_73893396
RefSNP(rs#)rs2232032
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPMar 29 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:91

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss211539163|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CACTTCGACC TGACTACTGC CCCTTTATCT TTTGCCCTGG CAGGATGACT TCTCGGAACC
 AGCTGGTGCA GAAGGTGCTG CAGGAGCTGC AGGAAGCAGT GGAGTGCGAA GGCCTGGAGG
 GTCTCATAGG TGCTTCCTTG GAGGCCAAGC AGGTCCTGTC TTCCTTCACT CTCCCCACCT
 GCCGGGAGGG AGGCCCTGGC
 Y
 TCCAGGTGCT GGAAGTGGAC TCGGTGGCCC TGAGCCTGTA TCCAGAAGAT GCTCCACGGA
 ACATGCTGCC GCTGGTGTGC AAGGGGGAGG GCAGCCTGCT GTTCGAGGCG GCCAGCATGC
 TGCTGTGGGG TGACGCAGGC CTCAGCCTGG AGCTGCGGGC CCGCACCGTG GTAGAGATGC
 TGCTGCACAG ACACTACTAC

  Submitted Frequency for ss211539163 back to top
There is no frequency submission for ss211539163.


  dbSNP summary of Genotypes for ss211539163 back to top
No sufficient data to compute Hardy-weinberg probability for ss211539163.


  Submitted individual genotype for ss211539163 back to top
There is no individual genotype data for ss211539163.