NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss23121396           
Submitter
HandleWUGSC_SSAHASNP
Submitter SNP IDWUGSC_WUchr7_SNPS_200403.chr1.NT_077402.1_767
RefSNP(rs#)rs10218493
Submitted Batch IDWUGSC_WUchr7_SNPS_200403
Submitted DateMar 22, 2004
Publication Cited[1] SNPs detected by comparing chromosome 7 reads to NCBI build 34 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 22 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWUGSC_WUCHR7_SNPS_200310
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualitytlp84b03.g1 -356 57

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss23121396|allelePos=501|len=1001|taxid=9606|alleles='G/A'|mol=Genomic
 TAAccctaac cctaacccta accccaaccc caaccccaac cccaacccca accccaaccc
 taacccctaa ccctaaccct aaccctaccc taaccctaac cctaacccta accctaaccc
 taacccctaa cccctaaccc taaccctaac cctaacccta accctaaccc taacccctaa
 ccctaaCCCT AACCCTAacc ctcgcggtac cctcagccgg cccgcccgcc cgggtctgac
 ctgaggagaa ctgtgctccg ccttcagagt accaccgaaa tctgtgcaga ggacaacgca
 gctccgccct cgcggtgctc tccgggtctg tgctgaggag aacgcaactc cgccggcgca
 ggcgcagaga ggcgcgccgc gccggcgcag gcgcagacac atgctagcgc gtcggggtgg
 aggcgtggcg caggcgcaga gaggcgcgcc gcgccggcgc aggcgcagag acacatgcta
 ccgcgtccag gggtggaggc
 R
 tggcgcaggc gcagagaggc gcaccgcgcc ggcgcaggcg cagagacaca tgctagcgcg
 tccaggggtg gaggcgtggc gcaggcgcag agacgcaagc ctacgggcgg gggttggggg
 ggcgtgtgtt gcaggagcaa agtcgcacgg cgccgggctg gggcgggggg agggtggcgc
 cgtgcacgcg cagaaactca cgtcacggtg gcgcggcgca gagacgggta gaacctcagt
 aatccgaaaa gccgggatcg accgcccctt gcttgcagcc gggcactaca ggacccgctt
 gctcacggtg ctgtgccagg gcgccccctg ctggcgacta gggcaactgc agggctctct
 tgcttagagt ggtggccagc gccccctgct ggcgccgggg cactgcaggg ccctcttgct
 tactgtatag tggtggcacg ccgcctgctg gcagctaggg acattgcagg gtcctcttgc
 tcaaggtgta gtggcagcac

  Submitted Frequency for ss23121396 back to top
There is no frequency submission for ss23121396.


  dbSNP summary of Genotypes for ss23121396 back to top
No sufficient data to compute Hardy-weinberg probability for ss23121396.


  Submitted individual genotype for ss23121396 back to top
There is no individual genotype data for ss23121396.