Submitted SNP(ss) Details: ss23837623

Submitted SNP(ss) Details: ss23837623

Submitter
Handle	PERLEGEN
Submitter SNP ID	afd0678373
RefSNP(rs#)	rs4018608
Submitted Batch ID	AFD_CHN_18-MAY-2004
Submitted Date	Aug 20, 2004
Publication Cited	N.D.
First entry to dbSNP	Aug 10 2004 12:00:00:000AM

Resource Links
GenBank Accession	NC_000001.5
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFD_CHIP_HYB
Ascertainment Samplesize	48
Population	AFD_CHN_PANEL

Allele
Observed Allele	T/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	c/t_g

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 TGCCCAGCAT TTACCACTAG CCACAAGCAA AACGAGCCGC AGAACGGGGG AGCCTCTGCG
 GCTGGAGGGA CGAGGACTCT GGAGACTC
 CAAGGCACTC AC
 Y
 GGGCAGAGCA GC
 TGTCTTCCTG GTAGAAGGGG CCACAGGTGA ACAGGCCACA CCTGAGAAAG TGCAGTGTGC
 AAGGGCCCAA GCACAGTGAG GGCAGGGA

Submitted Frequency for ss23837623

There is no frequency submission for ss23837623.

dbSNP summary of Genotypes for ss23837623

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AFD_AFR_PANEL - NORTH AMERICA	46	46	T=0.73913044	C=0.26086956	T/T=0.60869563 C/T=0.26086956 C/C=0.13043478	Pr(chiSq=2.407,df=1) =0.150	Genotype Freq.
AFD_CHN_PANEL - NORTH AMERICA	48	48	C=0.56250000	T=0.43750000	C/C=0.37500000 C/T=0.37500000 T/T=0.25000000	Pr(chiSq=1.361,df=1) =0.251	Genotype Freq.

Submitted individual genotype for ss23837623

There is no individual genotype data for ss23837623.

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