Submitted SNP(ss) Details: ss24214987

Submitted SNP(ss) Details: ss24214987

Submitter
Handle	PERLEGEN
Submitter SNP ID	afd1839105
RefSNP(rs#)	rs4970387
Submitted Batch ID	AFD_CHN_18-MAY-2004
Submitted Date	Aug 20, 2004
Publication Cited	N.D.
First entry to dbSNP	Aug 10 2004 12:00:00:000AM

Resource Links
GenBank Accession	NT_079624.1
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFD_CHIP_HYB
Ascertainment Samplesize	48
Population	AFD_CHN_PANEL

Allele
Observed Allele	A/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 ATTGCTGGTA ATAAAAAATA AGTCTTTAAT GGTATAAAAG CAAACTTCAG AGAATGTTTT
 CTTTTCCCCA GTTGACATCT AAATTAAA
 AGCTGGAAAA AA
 W
 TTTTATGGCT TT
 ATGCGTTTTT CACTTTACAA TTTCAACTTT TTCTGGTTAA AATTTTTCCA AACAGATTCC
 TGTGTATTTG AAAGACAAAT TTTTTTTA

Submitted Frequency for ss24214987

There is no frequency submission for ss24214987.

dbSNP summary of Genotypes for ss24214987

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AFD_AFR_PANEL - NORTH AMERICA	46	46	T=0.91304350	A=0.08695652	T/T=0.82608694 A/T=0.17391305	Pr(chiSq=0.035,df=1) =1.000	Genotype Freq.
AFD_CHN_PANEL - NORTH AMERICA	46	46	T=0.76086956	A=0.23913044	T/T=0.52173913 A/T=0.47826087	Pr(chiSq=0.957,df=1) =0.343	Genotype Freq.

Submitted individual genotype for ss24214987

There is no individual genotype data for ss24214987.

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