NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss253134996           
Submitter
HandleBL
Submitter SNP IDSNP66439_4_55294193
RefSNP(rs#)rs1008658
Submitted Batch IDIrish1_chr4
Submitted DateAug 18, 2010
Publication CitedN.D.
First entry to dbSNPAug 18 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodIRISH_GENOME_SEQUENCING
Ascertainment Samplesize2
PopulationIrish
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss253134996|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 ACAAGTTAAA ATGAATTTAA ATGGTTTTCT TTTCTCCTCC AACCTAATAG TGTATTCACA
 GAGACTTGGC AGCCAGAAAT ATCCTCCTTA CTCATGGTCG GATCACAAAG ATTTGTGATT
 TTGGTCTAGC CAGAGACATC AAGAATGATT CTAATTATGT GGTTAAAGGA AACGTGAGTA
 CCCATTCTCT GCTTGACAGT CCTGCAAAGG ATTTTTAGTT TCAACTTTCG ATAAAAATTG
 TTTCCTGTGA
 Y
 TTTCATAATG TAAATCCTGT CTAGGGATAT CACACATTTT AGCAGTCAAA TTAAGTATAC
 TTCAGCAAAA TTTGCATGGT ATGCTGAACA TTACTACAAC TAACATTCAA TAATAGAAGT
 CCTAATTCTA ATTGTGTAAT TTTGGGGCAT GTGAAGGAAA CAGAAATAGC CTTAATTTTC
 ATTATAGCCT GAGAATAGCA ATGAACTTGA TTTTGCTCAA GTGTAACAAA TGTAGGTCAT
 TGAAGGTCAC

  Submitted Frequency for ss253134996 back to top
There is no frequency submission for ss253134996.


  dbSNP summary of Genotypes for ss253134996 back to top
No sufficient data to compute Hardy-weinberg probability for ss253134996.


  Submitted individual genotype for ss253134996 back to top
There is no individual genotype data for ss253134996.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement