NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss253715914           
Submitter
HandleBL
Submitter SNP IDSNP113859_5_112203669
RefSNP(rs#)rs41115
Submitted Batch IDIrish1_chr5
Submitted DateAug 18, 2010
Publication CitedN.D.
First entry to dbSNPAug 18 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodIRISH_GENOME_SEQUENCING
Ascertainment Samplesize2
PopulationIrish
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginT:Germline C:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss253715914|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 GCAGTGGAAT GGTAAGTGGC ATTATAAGCC CCAGTGATCT TCCAGATAGC CCTGGACAAA
 CCATGCCACC AAGCAGAAGT AAAACACCTC CACCACCTCC TCAAACAGCT CAAACCAAGC
 GAGAAGTACC TAAAAATAAA GCACCTACTG CTGAAAAGAG AGAGAGTGGA CCTAAGCAAG
 CTGCAGTAAA TGCTGCAGTT CAGAGGGTCC AGGTTCTTCC AGATGCTGAT ACTTTATTAC
 ATTTTGCCAC
 R
 GAAAGTACTC CAGATGGATT TTCTTGTTCA TCCAGCCTGA GTGCTCTGAG CCTCGATGAG
 CCATTTATAC AGAAAGATGT GGAATTAAGA ATAATGCCTC CAGTTCAGGA AAATGACAAT
 GGGAATGAAA CAGAATCAGA GCAGCCTAAA GAATCAAATG AAAACCAAGA GAAAGAGGCA
 GAAAAAACTA TTGATTCTGA AAAGGACCTA TTAGATGATT CAGATGATGA TGATATTGAA
 ATACTAGAAG

  Submitted Frequency for ss253715914 back to top
There is no frequency submission for ss253715914.


  dbSNP summary of Genotypes for ss253715914 back to top
No sufficient data to compute Hardy-weinberg probability for ss253715914.


  Submitted individual genotype for ss253715914 back to top
There is no individual genotype data for ss253715914.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement