NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss254025885           
Submitter
HandleBL
Submitter SNP IDSNP11079_10_6360535
RefSNP(rs#)rs7910517
Submitted Batch IDIrish1_chr10
Submitted DateAug 19, 2010
Publication CitedN.D.
First entry to dbSNPAug 19 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodIRISH_GENOME_SEQUENCING
Ascertainment Samplesize2
PopulationIrish
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss254025885|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 GCCAGGCTGG AGTGCAGTGG CACGATCTTG GGTCACTGCA ACCTCCAACT CCCTGGTTCA
 AACAATTCTC CTGCTGCAGC CTCCCGAGTA GCTGGGATTA CAGGCACGCA CCACCACAGC
 CAGCTAATTT TTGTAATTTT TAGTAGAGAC GGGGTTTCAC CATGTTGTTC AGGCTGGTCT
 TGAACTCCTG ACCTCATGAT CTGCCCACCT CGGCCTCCCA AAGTACTGAG ATTACAGGCG
 TGAGCCACCG
 Y
 GCCTGGCCAG CCACTGTTGA TTTTTAACCA GTTATCCCCT GAAGACCATT TGGGTTGTTT
 CCAGTTTGAG GTTATTTGGA ATAAAATAGC CATCTGCATA GCCATTTTAA AGCTAAAGTG
 GATACTAACT TCTAGAGCAG AGGTTTGCGG AGGGCAGACT TTTGTACACA TTTCTATCCT
 CTAGGACTTA GCCTAGTGCT TGCATGCAGA TGCTCAATAA ATGCTCGTTT AAGGAATGAA
 TAGACACATA

  Submitted Frequency for ss254025885 back to top
There is no frequency submission for ss254025885.


  dbSNP summary of Genotypes for ss254025885 back to top
No sufficient data to compute Hardy-weinberg probability for ss254025885.


  Submitted individual genotype for ss254025885 back to top
There is no individual genotype data for ss254025885.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement