NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss254049983           
Submitter
HandleBL
Submitter SNP IDSNP15996_7_11563459
RefSNP(rs#)rs21
Submitted Batch IDIrish1_chr7
Submitted DateAug 19, 2010
Publication CitedN.D.
First entry to dbSNPAug 19 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodIRISH_GENOME_SEQUENCING
Ascertainment Samplesize2
PopulationIrish
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss254049983|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 AGCTCTGCCC TCTTTCTCCT CTTCTTCTGG AATTCCAATG ACATGAATGT TAGATCTTTT
 GTTACAGTCC CACAGGTCTC TGAAATACTT TTAGTTTTCT TCCCTCATAT TTTTTTCTGT
 GTTGTTCGGA TTAGGTAATT TTGATTATTC TGTATTTTAG TTCTTTGATT CTTTCCTCTC
 TCCCCTCCAT TATGCTGTTA GACCCGTATA CAGAGTTTTT ATATCTGTTA TTGCATTTTT
 CAGATCTGCA
 R
 TTTCTACTTG GTTCTTTTTT ACATCTTCAA TTAATTTGCT GAAGATTTCT ATTTGTTTCA
 AACATGCTCA TAACTGTTGA AAGATTTTCA TCATGGCTTC CTTATATCTT GTTGGATAAT
 TCTAACATCT TCATCATCTC AGTGTTGGCT GCTATTTATT TATTTTTTTC GTTGAATCTG
 GTAACTCCCT GGTTCTTGGC ATAAGGAGTG ACTTTGATTG AAACCCAGAC ATTTTTGCCT
 CATGTCACAA

  Submitted Frequency for ss254049983 back to top
There is no frequency submission for ss254049983.


  dbSNP summary of Genotypes for ss254049983 back to top
No sufficient data to compute Hardy-weinberg probability for ss254049983.


  Submitted individual genotype for ss254049983 back to top
There is no individual genotype data for ss254049983.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement