NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss254496872           
Submitter
HandleBL
Submitter SNP IDSNP104981_10_89613881
RefSNP(rs#)rs2943772
Submitted Batch IDIrish1_chr10
Submitted DateAug 19, 2010
Publication CitedN.D.
First entry to dbSNPAug 19 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodIRISH_GENOME_SEQUENCING
Ascertainment Samplesize2
PopulationIrish
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss254496872|allelePos=251|len=501|taxid=9606|alleles='G/C'|mol=Genomic
 GTGGGCTCGG GCGGGAGCCG GCTGAGGCGC GGCGGCGGCG GCGGCACCTC CCGCTCCTGG
 AGCGGGGGGG AGAAGCGGCG GCGGCGGCGG CCGCGGCGGC TGCAGCTCCA GGGAGGGGGT
 CTGAGTCGCC TGTCACCATT TCCAGGGCTG GGAACGCCGG AGAGTTGGTC TCTCCCCTTC
 TACTGCCTCC AACACGGCGG CGGCGGCGGC TGGCACATCC AGGGACCCGG GCCGGTTTTA
 AACCTCCCGT
 S
 CGCCGCCGCC GCACCCCCCG TGGCCCGGGC TCCGGAGGCC GCCGGCGGAG GCAGCCGTTC
 GGAGGATTAT TCGTCTTCTC CCCATTCCGC TGCCGCCGCT GCCAGGCCTC TGGCTGCTGA
 GGAGAAGCAG GCCCAGTCGC TGCAACCATC CAGCAGCCGC CGCAGCAGCC ATTACCCGGC
 TGCGGTCCAG AGCCAAGCGG CGGCAGAGCG AGGGGCATCA GCTACCGCCA AGTCCAGAGC
 CATTTCCATC

  Submitted Frequency for ss254496872 back to top
There is no frequency submission for ss254496872.


  dbSNP summary of Genotypes for ss254496872 back to top
No sufficient data to compute Hardy-weinberg probability for ss254496872.


  Submitted individual genotype for ss254496872 back to top
There is no individual genotype data for ss254496872.