NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss254496985           
Submitter
HandleBL
Submitter SNP IDSNP105004_10_89710887
RefSNP(rs#)rs555895
Submitted Batch IDIrish1_chr10
Submitted DateAug 19, 2010
Publication CitedN.D.
First entry to dbSNPAug 19 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodIRISH_GENOME_SEQUENCING
Ascertainment Samplesize2
PopulationIrish
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss254496985|allelePos=251|len=501|taxid=9606|alleles='G/T'|mol=Genomic
 ATGTTTCACT TTTGGGTAAA TACATTCTTC ATACCAGGAC CAGAGGAAAC CTCAGAAAAA
 GTAGAAAATG GAAGTCTATG TGATCAAGAA ATCGATAGCA TTTGCAGTAT AGAGCGTGCA
 GATAATGACA AGGAATATCT AGTACTTACT TTAACAAAAA ATGATCTTGA CAAAGCAAAT
 AAAGACAAAG CCAACCGATA CTTTTCTCCA AATTTTAAGG TCAGTTAAAT TAAACATTTT
 GTGGGGGTTG
 K
 TGACTTGTAT GTATGTGATG TGTGTTTAAT TCTAGGAGTA CAGCTGATGA AGAACTTGCT
 TGACAAGTTT TTAACTTATG TATTATTTCG AAGCAGTGTT TACGTAGCAG TAACATGAAA
 GTTTCTAATA AAATACCCAA TGTACACAGC GTCAAAAAAG CTGCATTTTT CCTTTTCCTA
 ATTCTTCGTT GTTTGCTGAA ATCTGGGGCA AAGGTGCGGG AGGGGGCTAA ATGACTGGGA
 TATGAAGTAG

  Submitted Frequency for ss254496985 back to top
There is no frequency submission for ss254496985.


  dbSNP summary of Genotypes for ss254496985 back to top
No sufficient data to compute Hardy-weinberg probability for ss254496985.


  Submitted individual genotype for ss254496985 back to top
There is no individual genotype data for ss254496985.