NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss262866771           
Submitter
HandleRSG_JCVI
Submitter SNP IDDPP10-592333_592334-C_G
RefSNP(rs#)rs2053724
Submitted Batch IDDPP10-R132_ISDP1-20100921
Submitted DateSep 24, 2010
Publication CitedN.D.
First entry to dbSNPSep 24 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodMETHOD-A
Ascertainment Samplesize232
PopulationR132_ISDP1
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss262866771|allelePos=256|len=511|taxid=9606|alleles='G/C'|mol=Genomic
 TATTTATATA TGTAAATATT GAAAAGAGCA GATATCTATT TATCTATCTA TCTATACATA
 AATTAATATG TAGCAACATC CTTATAGTGG TTCAGTTATT CTTATATATA AAATGGCAAA
 TGTATATTGT TGGTACTATA TCAATGCTCT GGCTCTAAAC ATACATTTTA ATTTTGTTTC
 CAAACTAGAG AATACTATAT CACTATGGTT AAATGGGTAA GCAATACCAA GACTGTGGTA
 AGATGGTTAA ACCGA
 S
 CTCAGAACAT CTCCATCCTC ACAGTCTGTG AGACCACTAC AGGTGCTTGT AGTAAAGTGA
 GTATAATTTA TTTTTCTTTT ATGCCTAAAA TGAAGTAGCT TATGCAGCTT TACAAAGGGG
 AAACAGGAAA TGCTTTGTAC AAAAAAAATT CAGTGTTTAA CTTTTAAAAC TAATAGGAAA
 AGAATTATTC TATTAAGAAT ATATACTTTA ATTTATAAAG CTTCCAAACT TTGAAGTGAA
 CAATATTGAT GATAA

  Submitted Frequency for ss262866771 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
R132_ISDP1232G=0.69396502
C=0.30603400
DPP10-R132_ISDP1-20100921RSG_JCVI


  dbSNP summary of Genotypes for ss262866771 back to top
No sufficient data to compute Hardy-weinberg probability for ss262866771.


  Submitted individual genotype for ss262866771 back to top
There is no individual genotype data for ss262866771.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement