NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss2739118           
Submitter
HandleTSC-CSHL
Submitter SNP IDTSC0857938
RefSNP(rs#)rs1800861
Submitted Batch ID001219_2
Submitted DateJan 02, 2001
Publication CitedN.D.
First entry to dbSNPJan 2 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTSC-SANGER-19-26
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral Allele
Allele OriginA:Germline C:Germline
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2739118|allelePos=86|len=591|taxid=9606|alleles='A/C'|mol=Genomic
 CATCCTGGCT GCAGGCCCCA TACAATTTGA TGACATGTGG GTGGTTGACC TGCTTCAGGA
 CGTTGAACTC TGACAGCAGG TCTCG
 M
 AGCTCACTCG GGGAGGCGTT CTCTGAAATG CAGCACAGAG CAGGTTGCAA ACGATCGCTC
 CTGGAAGCCC CTTCCATGAC CATACCAGGT CAGGATGGAC CTGCATCGCC TTGCCCAAGT
 TCAGACAGAG AGGCCTGCAA AGACGATGCT GCTTGAGGCT TCTCCCAGCC TTTGGGATCA
 GTGGACAGGG GCCTCATCCA CCCTGAGGAA GAAGCACCCT GAGGAGCCAG CAACCACACA
 TGCCGGATCT TTCCCCAGAG TGTCCCAGGG CTGGGCCACC TGTGTATGTG GCATTATGTT
 CCTGTAGTCA TTGTCTTTAG AAGACAGTCG TCCACAGAAA TTCCCCGCAT TAATCATTCT
 GGAAAGGTGA GGGGTACCCA CACACCCACT TGTCGGGAGA GGCCCTGGAG AAGGTGGAGA
 GCCATAAAGG AGGTCCACAC ACCGCGACCA GGCTCCCCAT TTCCCGCTCC TGTCTGAGAT
 GGCCAGCCTG GAGCCCAGGC ATCTC

  Submitted Frequency for ss2739118 back to top
There is no frequency submission for ss2739118.


  dbSNP summary of Genotypes for ss2739118 back to top
No sufficient data to compute Hardy-weinberg probability for ss2739118.


  Submitted individual genotype for ss2739118 back to top
There is no individual genotype data for ss2739118.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement