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Submitted SNP(ss) Details: ss2750609327           
Submitter
HandleGNOMAD
Submitter SNP IDrs199911222
RefSNP(rs#)rs1289159546
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleTA/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2750609327|allelePos=26|len=51|taxid=9606|alleles='TA/-'|mol=Genomic
 TTTGAAAAAT TATTGATTCA TACTC
 N
 TGTTATTATT TTGTATGCGA TGACA

  Submitted Frequency for ss2750609327 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FEMALE4274TA=1.00000000
-=0.00000000
gnomad-FEMALEGNOMAD
NFE3204TA=1.00000000
-=0.00000000
gnomad-NFEGNOMAD
OTH266TA=1.00000000
-=0.00000000
gnomad-OTHGNOMAD
EAS1498TA=1.00000000
-=0.00000000
gnomad-EASGNOMAD
ASJ54TA=1.00000000
-=0.00000000
gnomad-ASJGNOMAD
AMR262TA=1.00000000
-=0.00000000
gnomad-AMRGNOMAD
MALE5664TA=0.99982345
-=0.00017655
gnomad-MALEGNOMAD
AFR4146TA=0.99975878
-=0.00024120
gnomad-AFRGNOMAD
FIN508TA=1.00000000
-=0.00000000
gnomad-FINGNOMAD


  dbSNP summary of Genotypes for ss2750609327 back to top
No sufficient data to compute Hardy-weinberg probability for ss2750609327.


  Submitted individual genotype for ss2750609327 back to top
There is no individual genotype data for ss2750609327.