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Submitted SNP(ss) Details: ss2750670004           
Submitter
HandleGNOMAD
Submitter SNP IDrs149094393
RefSNP(rs#)rs149094393
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleGACG/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2750670004|allelePos=26|len=51|taxid=9606|alleles='GACG/-'|mol=Genomic
 CCATCTCTTA AAAAACAAAT ACATA
 N
 GACAGACAGA CACACACACC ACAGT

  Submitted Frequency for ss2750670004 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
NFE15016GACG=1.00000000
-=0.00000000
gnomad-NFEGNOMAD
AFR8702GACG=0.97575271
-=0.02424730
gnomad-AFRGNOMAD
EAS1622GACG=1.00000000
-=0.00000000
gnomad-EASGNOMAD
FEMALE13850GACG=0.99451262
-=0.00548736
gnomad-FEMALEGNOMAD
ASJ302GACG=1.00000000
-=0.00000000
gnomad-ASJGNOMAD
FIN3494GACG=1.00000000
-=0.00000000
gnomad-FINGNOMAD
MALE17106GACG=0.99199110
-=0.00800889
gnomad-MALEGNOMAD
AMR838GACG=0.99880666
-=0.00119332
gnomad-AMRGNOMAD
OTH982GACG=0.99898165
-=0.00101833
gnomad-OTHGNOMAD


  dbSNP summary of Genotypes for ss2750670004 back to top
No sufficient data to compute Hardy-weinberg probability for ss2750670004.


  Submitted individual genotype for ss2750670004 back to top
There is no individual genotype data for ss2750670004.

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