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Submitted SNP(ss) Details: ss2750973981           
Submitter
HandleGNOMAD
Submitter SNP IDrs4648417
RefSNP(rs#)rs4648417
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2750973981|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 GGCACCACTG CACCTCCAGC CTGGG
 Y
 GACAGAACGA GACTCCATCT CAAAA

  Submitted Frequency for ss2750973981 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
EAS1520C=0.67828947
T=0.32171053
gnomad-EASGNOMAD
NFE13410C=0.88717377
T=0.11282625
gnomad-NFEGNOMAD
FEMALE12152C=0.90083939
T=0.09916063
gnomad-FEMALEGNOMAD
OTH840C=0.87380952
T=0.12619048
gnomad-OTHGNOMAD
MALE15342C=0.89538521
T=0.10461478
gnomad-MALEGNOMAD
AFR7774C=0.97607410
T=0.02392591
gnomad-AFRGNOMAD
ASJ286C=0.88111889
T=0.11888112
gnomad-ASJGNOMAD
FIN2898C=0.89958590
T=0.10041407
gnomad-FINGNOMAD
AMR766C=0.75065273
T=0.24934725
gnomad-AMRGNOMAD


  dbSNP summary of Genotypes for ss2750973981 back to top
No sufficient data to compute Hardy-weinberg probability for ss2750973981.


  Submitted individual genotype for ss2750973981 back to top
There is no individual genotype data for ss2750973981.

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