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Submitted SNP(ss) Details: ss2751216404           
Submitter
HandleGNOMAD
Submitter SNP IDrs3170675
RefSNP(rs#)rs3170675
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2751216404|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 AGTAGAAGGG TGAACTGCTG ACACA
 Y
 TGGCTGACCT GGCACTCCAC AAACC

  Submitted Frequency for ss2751216404 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
ASJ302T=0.98344374
C=0.01655629
gnomad-ASJGNOMAD
MALE17084T=0.96089911
C=0.03910091
gnomad-MALEGNOMAD
AMR838T=0.97016704
C=0.02983293
gnomad-AMRGNOMAD
EAS1622T=1.00000000
C=0.00000000
gnomad-EASGNOMAD
NFE14976T=0.94290864
C=0.05709135
gnomad-NFEGNOMAD
OTH978T=0.94683027
C=0.05316973
gnomad-OTHGNOMAD
FEMALE13846T=0.95659399
C=0.04340604
gnomad-FEMALEGNOMAD
FIN3494T=0.92902118
C=0.07097882
gnomad-FINGNOMAD
AFR8720T=0.99036700
C=0.00963303
gnomad-AFRGNOMAD


  dbSNP summary of Genotypes for ss2751216404 back to top
No sufficient data to compute Hardy-weinberg probability for ss2751216404.


  Submitted individual genotype for ss2751216404 back to top
There is no individual genotype data for ss2751216404.

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