NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss275682484           
Submitter
HandleGMI
Submitter SNP IDGMI_AK_SNP_2645
RefSNP(rs#)rs11807848
Submitted Batch ID2009AK_SNP
Submitted DateDec 16, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodDIRECT DNA SEQUENCING
Ascertainment Samplesize2
PopulationAK_Koreans
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Chromosome-1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss275682484|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 GGCCCAGTAC AGCTGCCCCC ACAGGAGCCT CTACCACAGA AGCAGGCATG GAGGAGCTCG
 GAGGACCGTG GCGGGGACAG GGGAGGGTGT GTGTCTGCCT CGAGGCCTCT CCTCCAGGCC
 TTCCTCTCCT TCAAAGGGAC TGCCGCGGCC GAGGTGTGGC CTGCAGGGGT GGACTCTGAG
 GCCAGCAGGG GCCCGCCCGA CACCTCACCT GAGCTACACT CTTCCCCTGA CAGAGGTGGC
 CGATGGGGCT GGCTGAGCTG GGCCTTTTAT GCAGGAATGG ACGCCCTTGG GGTCAGCCTC
 AGGGGTTAAC CCTTAGCATC CTCTCAGGCC AGGATTCCAG GAAAGATGTT TCCTCCACAG
 GCCCTCAAGT TACCCCAGGG CAAAGAGTGG ATGGCCCAGG CCCTGTGCAG AAAGAGTCCT
 GGGTCCTCCG TCCTCTTCCA ACCTCCTGCT GAGAGTCCCA GGCAAGCACA GATTCCCAGG
 CTGGGGTATC CCATCCAGAC
 Y
 TTCGCCCTCT GTACCCTTCG TGCTGGGCCT GGGGTGGAGT GTACTTGGAG GGGACCCATC
 CTCAATCCAC CTCGTTCCGG AGAGCTGAGC CCTCAAGAAG CCCAGGAGAG CAGCTCGGGG
 GAGCACGGAC CCTGCTTCCA GCCCTGGGCC ATTCGCCCGC TGGAAAAAAA TCCCCAAAAT
 TTGCTGATAA ATATAAGAAA GTCACAGCAG CCTTCAAACA AGCAGACTCC ATAGACAGAC
 TCCAGAACCG CTCCGCAGGC ACAGGAGACA CCAAACACAC TGCTGTCCGT CACAGTCAGG
 GACCCCCCGG GAAGGACGGG GGACGGAGGA GGGCAGGGGC CGCGGGGTGG GGGCCGAGGG
 CCTCCCCGTC AGCTGGCAGC AGCGGCCCCT CAGCAGCCTG GAGTGCTGGC CTGCCAGCCG
 GTCTGCCTGT CCTGCGCCAT GGCCTCCCTG TGCGTCTGTG AAGTCAGTGT GAGCTGCTCC
 CGGGGCGGCA CCGGCGTGGT

  Submitted Frequency for ss275682484 back to top
There is no frequency submission for ss275682484.


  dbSNP summary of Genotypes for ss275682484 back to top
No sufficient data to compute Hardy-weinberg probability for ss275682484.


  Submitted individual genotype for ss275682484 back to top
There is no individual genotype data for ss275682484.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement