NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss275689108           
Submitter
HandleGMI
Submitter SNP IDGMI_AK_SNP_9269
RefSNP(rs#)rs2993498
Submitted Batch ID2009AK_SNP
Submitted DateDec 16, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodDIRECT DNA SEQUENCING
Ascertainment Samplesize2
PopulationAK_Koreans
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Chromosome-1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss275689108|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 AGAGGGGCCG GGGCACTGGG CCTGAGGCTG TTGAGAGCCT GGTGCTTCTG AGGAGGACTG
 GGTGGTGGCC CCACTGGGGC CCGAGGGGGC TGGAGGGCCA GAAGCGGCTC AGGGGCCCGA
 GGGCTGGTGC GAGATGGATA GCTTTGCCTG GCTCACACAC AGCGGGTACC TGAGCAGAGG
 CAGGGATGGG GATCCTGCCA GGGCTGGGGG AGTGGTCACA GGGCAAAGGC TGGACAAGGT
 GGGGCTTGGG GAGTTGTGGT GTGGGTGCGC TGGGTGGCAG AGCTGGCAGG AACTGGCAAT
 GAATTACACA TGGGGTTTGG GAAAGGGAAG GCACCCCCAG GTTTCTGTCC CAAGCACCTG
 GGCCAGTGGA GGCATTTGGC CAGGCCAGCA TGGGGGGGAG CAGCTCCCGG CGGGCTGCCT
 GAGGGTCCAC TGGTATCAGC GAGGCAGTGC TGGCCATTGC TGGGCTGGCA TTGGAAGGTA
 AGGGCAGAGG GCTGTGCCCA
 Y
 AGGGCTGATA GTGCTGGCCC TGTCACTGAA TAGTGGGCAC CTGTTCTCTA GTGGGCAGGT
 GTGGCTCCAT GACAACAGCG CCTGGGGCCA ACAGAGCCCT GCCACCCAGA CGACCAGAAG
 GAGAGGGGGC CAGCCTTTCT CTCCCCTGCC CCACCAGAGG CCAGGATGGC AGCATGGCCA
 GGGGGCAGGC CCTAGGGCCA GGTGTCATGG GCTTAAGCCT GGCAAGAGCA GCTCACACCT
 CATCAGGGTG GGGCCAGTAG GTGCCCCAGG AATTTTGGTG TCTGCTGCTG CCATGGCCTC
 AGGGAAGGAA GCCGAGGGCC CAGGAAGCAG GGCTGCCATT TCCCAGGGTC AAGTGTCTCC
 AAGAGCAAAG CTGCTCACCT TGAACCTCAC CCTGCCTATG TCCCCACCCT GTTGGTCTTG
 GGGGACCAGT CTGGTGGATT CCAGAAGGCT GTGGCTACAG CTAGGCTTTC GGGCTTGGGC
 AAAGAGCTGG GAGCAGGTGG

  Submitted Frequency for ss275689108 back to top
There is no frequency submission for ss275689108.


  dbSNP summary of Genotypes for ss275689108 back to top
No sufficient data to compute Hardy-weinberg probability for ss275689108.


  Submitted individual genotype for ss275689108 back to top
There is no individual genotype data for ss275689108.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement